RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 GEMP55040 296 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 CTBSQ01459 385 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 KLF1Q13351 362 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-231ENST00000641939 PEX6Q13608 980 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 SLC1A5Q15758 541 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 C14orf28Q4W4Y0 310 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 PYCR3Q53H96 274 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 ZNF569Q5MCW4 686 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 ANKRD20A2Q5SQ80 823 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 ANKRD20A1Q5TYW2 823 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 ANKRD20A3Q5VUR7 823 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 ALS2CLQ60I27 953 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 MARK2Q7KZI7 788 aaKnown RBP14.92□□□□□ -0.02
PHGDH-231ENST00000641939 GALNT13Q8IUC8 556 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 CCDC74AQ96AQ1 378 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 OR2M4Q96R27 311 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 GORASP1Q9BQQ3 440 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 FSD1LQ9BXM9 530 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 NRSN2Q9GZP1 204 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 SPATS2LQ9NUQ6 558 aaKnown RBP14.92□□□□□ -0.02
PHGDH-231ENST00000641939 TAAR2Q9P1P5 351 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 GPSM3Q9Y4H4 160 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 OAS3Q9Y6K5 1087 aaKnown RBP14.92□□□□□ -0.02
PHGDH-231ENST00000641939 SRRM3A6NNA2 597 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-231ENST00000641939 TAF4O00268 1085 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 AURKAO14965 403 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 CSO75390 466 aaKnown RBP14.91□□□□□ -0.02
PHGDH-231ENST00000641939 FGF1P05230 155 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 CCDC175P0C221 793 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 BPIP17213 487 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 AK4P27144 223 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-231ENST00000641939 PSMB4P28070 264 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 HMGCLP35914 325 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 PRPSAP1Q14558 356 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 RTP5Q14D33 572 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 CERCAMQ5T4B2 595 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 PDPK2PQ6A1A2 396 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 SLC30A9Q6PML9 568 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 RBM44Q6ZP01 1051 aaKnown RBP14.91□□□□□ -0.02
PHGDH-231ENST00000641939 ZNF662Q6ZS27 426 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 SFTPA2Q8IWL1 248 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 TRAM1L1Q8N609 369 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 CCDC110Q8TBZ0 833 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 SPATA13Q96N96 652 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 HACD3Q9P035 362 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 RABGEF1Q9UJ41 708 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 AAR2Q9Y312 384 aaKnown RBP14.91□□□□□ -0.02
PHGDH-231ENST00000641939 PCDHB1Q9Y5F3 818 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 ST14Q9Y5Y6 855 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 AK5Q9Y6K8 562 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 CHD6Q8TD26 2715 aa14.91□□□□□ -0.02
PHGDH-231ENST00000641939 ZNF106Q9H2Y7 1883 aaKnown RBP14.91□□□□□ -0.02
PHGDH-231ENST00000641939 CFAP47Q6ZTR5 3102 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 NRDCO43847 1150 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 DNAJC6O75061 913 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 AGTP01019 485 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 PNLIPP16233 465 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 GLB1P16278 677 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 ACTR1BP42025 376 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 ACTR1AP61163 376 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 LRP8Q14114 963 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 SPIDRQ14159 915 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 HLTFQ14527 1009 aaKnown RBP eCLIP14.9□□□□□ -0.02
PHGDH-231ENST00000641939 SEL1L2Q5TEA6 688 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 GLT6D1Q7Z4J2 308 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 TTC30BQ8N4P2 665 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 BLOC1S5Q8TDH9 187 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 ZDHHC1Q8WTX9 485 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 GLYATL1Q969I3 302 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 PPP1R2P1Q96PQ5 205 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 PLEKHG4BQ96PX9 1271 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 FICDQ9BVA6 458 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 RMI1Q9H9A7 625 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 BPIFA1Q9NP55 256 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 ZNHIT2Q9UHR6 403 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 APPL1Q9UKG1 709 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 PLEKHM1Q9Y4G2 1056 aa14.9□□□□□ -0.02
PHGDH-231ENST00000641939 TCRBV7S2A1N4TA0A589 114 aa14.89□□□□□ -0.03
PHGDH-231ENST00000641939 C5orf60A6NFR6 353 aa14.89□□□□□ -0.03
PHGDH-231ENST00000641939 NTN3O00634 580 aaPredicted RBP14.89□□□□□ -0.03
PHGDH-231ENST00000641939 CASC3O15234 703 aaKnown RBP14.89□□□□□ -0.03
PHGDH-231ENST00000641939 NUDT21O43809 227 aaKnown RBP14.89□□□□□ -0.03
PHGDH-231ENST00000641939 SLC25A14O95258 325 aaPredicted RBP14.89□□□□□ -0.03
PHGDH-231ENST00000641939 ADRA1AP35348 466 aa14.89□□□□□ -0.03
PHGDH-231ENST00000641939 CCZ1BP86790 482 aa14.89□□□□□ -0.03
PHGDH-231ENST00000641939 CCZ1P86791 482 aaPredicted RBP14.89□□□□□ -0.03
PHGDH-231ENST00000641939 ISXQ2M1V0 245 aa14.89□□□□□ -0.03
PHGDH-231ENST00000641939 ZDHHC20Q5W0Z9 365 aa14.89□□□□□ -0.03
PHGDH-231ENST00000641939 C17orf82Q86X59 251 aaPredicted RBP14.89□□□□□ -0.03
PHGDH-231ENST00000641939 PHYKPLQ8IUZ5 450 aa14.89□□□□□ -0.03
PHGDH-231ENST00000641939 SLC35B2Q8TB61 432 aa14.89□□□□□ -0.03
PHGDH-231ENST00000641939 GRAMD1AQ96CP6 724 aa14.89□□□□□ -0.03
PHGDH-231ENST00000641939 ALS2CR12Q96Q35 445 aa14.89□□□□□ -0.03
PHGDH-231ENST00000641939 CARD9Q9H257 536 aa14.89□□□□□ -0.03
PHGDH-231ENST00000641939 SYNDIG1Q9H7V2 258 aa14.89□□□□□ -0.03
PHGDH-231ENST00000641939 TRIM39Q9HCM9 518 aa14.89□□□□□ -0.03
PHGDH-231ENST00000641939 LZTFL1Q9NQ48 299 aa14.89□□□□□ -0.03
PHGDH-231ENST00000641939 LRIT1Q9P2V4 623 aa14.89□□□□□ -0.03
PHGDH-231ENST00000641939 R3HDM2Q9Y2K5 976 aaKnown RBP14.89□□□□□ -0.03
PHGDH-231ENST00000641939 PRKAB1Q9Y478 270 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms