RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 PCDHB18PQ96TA0 734 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 SNRNP25Q9BV90 132 aaKnown RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 TRPV4Q9HBA0 871 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 QPCTLQ9NXS2 382 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 PCDHA3Q9Y5H8 950 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 ACTL7BQ9Y614 415 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 A8MUI8 341 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 RNF225M0QZC1 329 aaPredicted RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 GFRA2O00451 464 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 SNRPAP09012 282 aaKnown RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 CHRNB2P17787 502 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 FASP25445 335 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 PSMB9P28065 219 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 COILP38432 576 aaPredicted RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 ITGA8P53708 1063 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 EFR3AQ14156 821 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 UBXN2BQ14CS0 331 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 QPCTQ16769 361 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 GPR107Q5VW38 600 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 PDPK2PQ6A1A2 396 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 ELMOD2Q8IZ81 293 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 PCDH20Q8N6Y1 951 aaKnown RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 MCUQ8NE86 351 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 FNDC8Q8TC99 324 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 BCL7CQ8WUZ0 217 aaPredicted RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 TFB1MQ8WVM0 346 aaKnown RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 DDX1Q92499 740 aaKnown RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 FSD1LQ9BXM9 530 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 SP140LQ9H930 580 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 FAIMQ9NVQ4 179 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 KCNK4Q9NYG8 393 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 FAM8A1Q9UBU6 413 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 WNT16Q9UBV4 365 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 MARCOQ9UEW3 520 aaPredicted RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 GRID1Q9ULK0 1009 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 CXorf51AA0A1B0GTR3 108 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 CLDN25C9JDP6 229 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 APOC4-APOC2K7ER74 178 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 GABBR2O75899 941 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 APOC2P02655 101 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 FAM153BP0C7A2 387 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 CYP2A6P11509 494 aaPredicted RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 HMGA1P17096 107 aaKnown RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 ERCC2P18074 760 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 TCN1P20061 433 aaPredicted RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 THOP1P52888 689 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 GNA12Q03113 381 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 FAM153CQ494X1 144 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 GALNT18Q6P9A2 607 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 TPGS1Q6ZTW0 290 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 KIAA0408Q6ZU52 694 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 FRMD7Q6ZUT3 714 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 MYO1HQ8N1T3 1032 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 KYQ8NBH2 561 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 SMRP1Q8NCR6 262 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 SETD9Q8NE22 299 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 KBTBD8Q8NFY9 601 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 C1orf54Q8WWF1 131 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 SIPA1Q96FS4 1042 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 ASB16Q96NS5 453 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 FAM118BQ9BPY3 351 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 UNKQ9C0B0 810 aaKnown RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 LIMD1Q9UGP4 676 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 SFMBT1Q9UHJ3 866 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 VPS9D1Q9Y2B5 631 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 C5orf60A6NFR6 353 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 LRRC72A6NJI9 287 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 ZSCAN5BA6NJL1 495 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 TRIM49D1C9J1S8 452 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 CBX4O00257 560 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 DFFAO00273 331 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 TNFRSF10BO14763 440 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 BNIP3LO60238 219 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 DNTTP04053 509 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 DLDP09622 509 aaKnown RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 ZNF23P17027 643 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 ATF6P18850 670 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 HALP42357 657 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 HNRNPDQ14103 355 aaKnown RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 ANKDD1AQ495B1 522 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 LY6G5CQ5SRR4 150 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 PRMT9Q6P2P2 845 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 XKRXQ6PP77 449 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 CD300LGQ6UXG3 332 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 RABEPKQ7Z6M1 372 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 CCNJLQ8IV13 435 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 DHRSXQ8N5I4 330 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 AMER2Q8N7J2 671 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 DNAAF3Q8N9W5 541 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 ADCY4Q8NFM4 1077 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 PYDC1Q8WXC3 89 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 AIFM2Q9BRQ8 373 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 SLC46A2Q9BY10 475 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 POLR1EQ9GZS1 481 aaKnown RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 ARHGEF3Q9NR81 526 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 EHD3Q9NZN3 535 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 SUSD2Q9UGT4 822 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 RAPGEFL1Q9UHV5 662 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 TMEM59LQ9UK28 342 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 NUDT5Q9UKK9 219 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms