RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 TIMMDC1Q9NPL8 285 aa4.32□□□□□ -1.72
GABRA1-220ENST00000638159 ABCF3Q9NUQ8 709 aa4.32□□□□□ -1.72
GABRA1-220ENST00000638159 P4HTMQ9NXG6 502 aa4.32□□□□□ -1.72
GABRA1-220ENST00000638159 IL1RAPL1Q9NZN1 696 aa4.32□□□□□ -1.72
GABRA1-220ENST00000638159 APPL1Q9UKG1 709 aa4.32□□□□□ -1.72
GABRA1-220ENST00000638159 PLXNA3P51805 1871 aa4.32□□□□□ -1.72
GABRA1-220ENST00000638159 TLN2Q9Y4G6 2542 aa4.32□□□□□ -1.72
GABRA1-220ENST00000638159 HIVEP3Q5T1R4 2406 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 A8MV72 311 aaPredicted RBP4.31□□□□□ -1.72
GABRA1-220ENST00000638159 A8MX80 341 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 DFFAO00273 331 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 PIK3R2O00459 728 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 VPS26AO75436 327 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 ZBTB11O95625 1053 aaPredicted RBP4.31□□□□□ -1.72
GABRA1-220ENST00000638159 CPP00450 1065 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 PLGP00747 810 aaPredicted RBP4.31□□□□□ -1.72
GABRA1-220ENST00000638159 KLKB1P03952 638 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 TIMP2P16035 220 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 CD44P16070 742 aaKnown RBP4.31□□□□□ -1.72
GABRA1-220ENST00000638159 EPHB2P29323 1055 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 HLA-FP30511 346 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 IDUAP35475 653 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 DEKP35659 375 aaKnown RBP4.31□□□□□ -1.72
GABRA1-220ENST00000638159 IRAK1P51617 712 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 DCDP81605 110 aaKnown RBP4.31□□□□□ -1.72
GABRA1-220ENST00000638159 WASHC5Q12768 1159 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 FZD2Q14332 565 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 PSMD6Q15008 389 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 POU4F3Q15319 338 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 SHBQ15464 509 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 INAQ16352 499 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 ARSJQ5FYB0 599 aaPredicted RBP4.31□□□□□ -1.72
GABRA1-220ENST00000638159 C1orf189Q5VU69 101 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 TMEM198Q66K66 360 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 C11orf57Q6ZUT1 292 aaPredicted RBP4.31□□□□□ -1.72
GABRA1-220ENST00000638159 CHSY3Q70JA7 882 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.31□□□□□ -1.72
GABRA1-220ENST00000638159 TMCO5AQ8N6Q1 288 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 ANKRD52Q8NB46 1076 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 BSNDQ8WZ55 320 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 MENTQ9BUN1 341 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 ZYG11BQ9C0D3 744 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 PCDH12Q9NPG4 1184 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 KCNK6Q9Y257 313 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 NOTCH1P46531 2555 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 A0A0A0MRY4 1105 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 GTPBP10A4D1E9 387 aaKnown RBP4.31□□□□□ -1.72
GABRA1-220ENST00000638159 TMEM150CB9EJG8 249 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 SYF2O95926 243 aaKnown RBP4.31□□□□□ -1.72
GABRA1-220ENST00000638159 IGLV3-19P01714 112 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 GRK3P35626 688 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 PRCPP42785 496 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 ZFP36L2P47974 494 aaKnown RBP4.31□□□□□ -1.72
GABRA1-220ENST00000638159 EMP2P54851 167 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 CDH15P55291 814 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 ATP1A4Q13733 1029 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 MAP7Q14244 749 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 KRT81Q14533 505 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 ATL3Q6DD88 541 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 CLEC2AQ6UVW9 174 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 LINGO4Q6UY18 593 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 NCCRP1Q6ZVX7 275 aaPredicted RBP4.31□□□□□ -1.72
GABRA1-220ENST00000638159 OSTM1Q86WC4 334 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 C1orf127Q8N9H9 656 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 PPP4R1Q8TF05 950 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 KCNJ9Q92806 393 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 DHX58Q96C10 678 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 TBC1D31Q96DN5 1066 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 CCL19Q99731 98 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 HDAC8Q9BY41 377 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 LRRC3Q9BY71 257 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 FOXP1Q9H334 677 aaPredicted RBP4.31□□□□□ -1.72
GABRA1-220ENST00000638159 KLC4Q9NSK0 619 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 FAIMQ9NVQ4 179 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 AIPL1Q9NZN9 384 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 KIF17Q9P2E2 1029 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 LOC101059948A0A1B0GTJ6 334 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 QSOX1O00391 747 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 PSMA7O14818 248 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 POLR2DO15514 142 aaKnown RBP4.31□□□□□ -1.72
GABRA1-220ENST00000638159 PRAMEF2O60811 474 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 HSF2BPO75031 334 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 DNAJC6O75061 913 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 UBXN7O94888 489 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 CDK14O94921 469 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 ALDOAP04075 364 aaKnown RBP4.31□□□□□ -1.72
GABRA1-220ENST00000638159 LMO2P25791 158 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 HOXC12P31275 282 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 CHRNA4P43681 627 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 AVPR1BP47901 424 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 DCAF7P61962 342 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 DLG4P78352 724 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 SOWAHAQ2M3V2 549 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 PTCHD3Q3KNS1 767 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 MS4A13Q5J8X5 152 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 Q5PR19 223 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 ATP1A1-AS1Q5TC04 95 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 LCTLQ6UWM7 567 aa4.31□□□□□ -1.72
GABRA1-220ENST00000638159 MEPCEQ7L2J0 689 aaKnown RBP4.31□□□□□ -1.72
GABRA1-220ENST00000638159 EXD1Q8NHP7 514 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms