RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 SPATA16Q9BXB7 569 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 CEP41Q9BYV8 373 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 TRIM5Q9C035 493 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 RMI1Q9H9A7 625 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 ZFYVE1Q9HBF4 777 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 PLEKHM1Q9Y4G2 1056 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 PCDHB11Q9Y5F2 797 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 HGSO14964 777 aaPredicted RBP17.78■□□□□ 0.44
PNKP-225ENST00000636214 NVLO15381 856 aaKnown RBP17.78■□□□□ 0.44
PNKP-225ENST00000636214 PSTPIP1O43586 416 aa17.78■□□□□ 0.44
PNKP-225ENST00000636214 ATP1A1P05023 1023 aaKnown RBP17.78■□□□□ 0.44
PNKP-225ENST00000636214 MMP2P08253 660 aa17.78■□□□□ 0.44
PNKP-225ENST00000636214 COMTP21964 271 aa17.78■□□□□ 0.44
PNKP-225ENST00000636214 CLN3Q13286 438 aa17.78■□□□□ 0.44
PNKP-225ENST00000636214 IHHQ14623 411 aa17.78■□□□□ 0.44
PNKP-225ENST00000636214 NR1D2Q14995 579 aa17.78■□□□□ 0.44
PNKP-225ENST00000636214 HENMT1Q5T8I9 393 aaKnown RBP17.78■□□□□ 0.44
PNKP-225ENST00000636214 NPNTQ6UXI9 565 aa17.78■□□□□ 0.44
PNKP-225ENST00000636214 CHST15Q7LFX5 561 aaPredicted RBP17.78■□□□□ 0.44
PNKP-225ENST00000636214 OR10G6Q8NH81 332 aa17.78■□□□□ 0.44
PNKP-225ENST00000636214 SRPK1Q96SB4 655 aaKnown RBP17.78■□□□□ 0.44
PNKP-225ENST00000636214 SLC38A3Q99624 504 aa17.78■□□□□ 0.44
PNKP-225ENST00000636214 NUDT22Q9BRQ3 303 aa17.78■□□□□ 0.44
PNKP-225ENST00000636214 GPR63Q9BZJ6 419 aa17.78■□□□□ 0.44
PNKP-225ENST00000636214 SLC25A51Q9H1U9 297 aa17.78■□□□□ 0.44
PNKP-225ENST00000636214 SEMA6CQ9H3T2 930 aa17.78■□□□□ 0.44
PNKP-225ENST00000636214 SCN8AQ9UQD0 1980 aa17.78■□□□□ 0.44
PNKP-225ENST00000636214 A0A0A6YYK5 440 aaPredicted RBP17.77■□□□□ 0.44
PNKP-225ENST00000636214 C3orf70A6NLC5 250 aaPredicted RBP17.77■□□□□ 0.44
PNKP-225ENST00000636214 B4GAT1O43505 415 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 PRB1P04280 392 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 LIPCP11150 499 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 ITIH1P19827 911 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 NR2C2P49116 596 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 GPLD1P80108 840 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 CDK18Q07002 472 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 TRA2AQ13595 282 aaKnown RBP eCLIP17.77■□□□□ 0.44
PNKP-225ENST00000636214 SLC14A2Q15849 920 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 ALS2CLQ60I27 953 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 KAZNQ674X7 775 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 LYSMD3Q7Z3D4 306 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 PHYKPLQ8IUZ5 450 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 CNTD1Q8N815 330 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 TFB1MQ8WVM0 346 aaKnown RBP17.77■□□□□ 0.44
PNKP-225ENST00000636214 USP7Q93009 1102 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 IMP4Q96G21 291 aaKnown RBP17.77■□□□□ 0.44
PNKP-225ENST00000636214 OLFM3Q96PB7 478 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 ZSCAN5AQ9BUG6 496 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 ACSL6Q9UKU0 697 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 SHOC2Q9UQ13 582 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 HYOU1Q9Y4L1 999 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 KALRNO60229 2985 aa17.77■□□□□ 0.44
PNKP-225ENST00000636214 TRBV23OR9-2A0A075B6M9 112 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 PRAMEF33A0A0G2JMD5 474 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 K7ENP7 123 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 MTSS1O43312 755 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 DUX1O43812 170 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 PRAMEF10O60809 474 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 ACP5P13686 325 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 CD82P27701 267 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 CSTF2P33240 577 aaKnown RBP eCLIP17.76■□□□□ 0.43
PNKP-225ENST00000636214 MAGEA1P43355 309 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 SPA17Q15506 151 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 TEX44Q53QW1 395 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 INO80CQ6PI98 192 aaPredicted RBP17.76■□□□□ 0.43
PNKP-225ENST00000636214 MFSD7Q6UXD7 560 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 SLC9B2Q86UD5 537 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 CCDC50Q8IVM0 306 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 AVL9Q8NBF6 648 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 OR4D9Q8NGE8 314 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 SLC37A2Q8TED4 501 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 SH3KBP1Q96B97 665 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 WBP1Q96G27 269 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 CCDC74BQ96LY2 380 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 HERPUD2Q9BSE4 406 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 GLOD4Q9HC38 313 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 KCNK6Q9Y257 313 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.76■□□□□ 0.43
PNKP-225ENST00000636214 ZNF711Q9Y462 761 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 PRKAB1Q9Y478 270 aa17.76■□□□□ 0.43
PNKP-225ENST00000636214 COL6A6A6NMZ7 2263 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 IGHV1OR21-1A0A087WYE8 117 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 FADS2P1A8MWK0 482 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 PPM1DO15297 605 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 GRID2O43424 1007 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 CST8O60676 142 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 SNX2O60749 519 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 DNAJC6O75061 913 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 SLC25A14O95258 325 aaPredicted RBP17.75■□□□□ 0.43
PNKP-225ENST00000636214 CD1CP29017 333 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 CYLC1P35663 651 aaPredicted RBP17.75■□□□□ 0.43
PNKP-225ENST00000636214 FASLGP48023 281 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 DCDC1P59894 354 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 HHEXQ03014 270 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 C16orf72Q14CZ0 275 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 TCEAL1Q15170 157 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 MANEAQ5SRI9 462 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 NKAIN2Q5VXU1 208 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 PDPK2PQ6A1A2 396 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 TMPRSS9Q7Z410 1059 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms