RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 LATS1O95835 1130 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 LAMP2P13473 410 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF16P17020 682 aaPredicted RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 AGXTP21549 392 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 RPL10P27635 214 aaKnown RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 ACOT2P49753 483 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 HERV-K104P61576 105 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 RAB35Q15286 201 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 GRIK4Q16099 956 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 PAN2Q504Q3 1202 aaKnown RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 ADGRF4Q8IZF3 695 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 SH2D3CQ8N5H7 860 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 EIF1ADQ8N9N8 165 aaKnown RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 C12orf50Q8NA57 414 aaPredicted RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 OR5B12Q96R08 314 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 SLC5A7Q9GZV3 580 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 C14orf105Q9NVL8 296 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 TAS2R7Q9NYW3 318 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF221Q9UK13 617 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 MAN2B2Q9Y2E5 1009 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 TRPV2Q9Y5S1 764 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 SLC12A8A0AV02 714 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 MPPED1O15442 326 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 ORC5O43913 435 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 STK17BO94768 372 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 KDM4BO94953 1096 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 IL1BP01584 269 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 MAPK3P27361 379 aaPredicted RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 TXNL4AP83876 142 aaKnown RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 MAPKAPK3Q16644 382 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 FBXO47Q5MNV8 452 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 LRIF1Q5T3J3 769 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 TAPT1Q6NXT6 567 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 B3GNT6Q6ZMB0 384 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 CREB3L2Q70SY1 520 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 CPA6Q8N4T0 437 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 TMEM199Q8N511 208 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF540Q8NDQ6 660 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 SPATA4Q8NEY3 305 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 TM9SF4Q92544 642 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 PPP3R2Q96LZ3 170 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 KXD1Q9BQD3 176 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 DDX18Q9NVP1 670 aaKnown RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 PCDHGA6Q9Y5G7 932 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 PBRM1Q86U86 1689 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 A0A0D9SFI3 127 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 USP27XA6NNY8 438 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 TRAFD1O14545 582 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 C21orf2O43822 256 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 ATG13O75143 517 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 PIGNO95427 931 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 GRK6P43250 576 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 GLRBP48167 497 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 SLC1A6P48664 564 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 NDUFV1P49821 464 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 NFKB2Q00653 900 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 SCN1BQ07699 218 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 PDIA5Q14554 519 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 GUK1Q16774 197 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 PAMR1Q6UXH9 720 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 CYP2R1Q6VVX0 501 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 FBXO33Q7Z6M2 555 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 DEFB107AQ8IZN7 70 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 OR14K1Q8NGZ2 314 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 GRIN3AQ8TCU5 1115 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 TSPAN18Q96SJ8 248 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 ZDHHC6Q9H6R6 413 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 MRPL17Q9NRX2 175 aaKnown RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 KCTD5Q9NXV2 234 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 ITGA11Q9UKX5 1188 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 PCDHA2Q9Y5H9 948 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 MYPNQ86TC9 1320 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 BTN3A1O00481 513 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 FBP2O00757 339 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 PER2O15055 1255 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 KCNQ3O43525 872 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 ADARP55265 1226 aaKnown RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 GNMTQ14749 295 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 ABRAXAS2Q15018 415 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 FAXCQ5TGI0 409 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 FAM131AQ6UXB0 335 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 L3MBTL4Q8NA19 623 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 THAP6Q8TBB0 222 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 STAG3L4Q8TBR4 150 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 OR8D1Q8WZ84 308 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 SLC39A3Q9BRY0 314 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 GRIP2Q9C0E4 1043 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 POLR1EQ9GZS1 481 aaKnown RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 PCBD2Q9H0N5 130 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 ACTR10Q9NZ32 417 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 VSX1Q9NZR4 365 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 REV1Q9UBZ9 1251 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 COG5Q9UP83 839 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 ACTL7BQ9Y614 415 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 WNK2Q9Y3S1 2297 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 ITGA2BP08514 1039 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 PEPDP12955 493 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 MSX1P28360 303 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 PRKCDQ05655 676 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 CHAF1BQ13112 559 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms