RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 SLC25A13Q9UJS0 675 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 VPS28Q9UK41 221 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 TNNQ9UQP3 1299 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 PKP3Q9Y446 797 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 LYVE1Q9Y5Y7 322 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 SIRT4Q9Y6E7 314 aaPredicted RBP2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 SCN10AQ9Y5Y9 1956 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 LAMA1P25391 3075 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 ZZEF1O43149 2961 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 PLIN4Q96Q06 1357 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 CACNA1AO00555 2505 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 CFAP47Q6ZTR5 3102 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 SPEGQ15772 3267 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 ZNF318Q5VUA4 2279 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 C17orf113A0A1B0GUU1 675 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 SLC15A5A6NIM6 579 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 C16orf96A6NNT2 1141 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 C17orf100A8MU93 164 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 MCIDASD6RGH6 385 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 H3BNX3 289 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 SYN3O14994 580 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 PER2O15055 1255 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 TGFB1I1O43294 461 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 AHCYL1O43865 530 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 SLC28A2O43868 658 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 HBP1O60381 514 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 PLOD3O60568 738 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 SEC14L2O76054 403 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 GH2P01242 217 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 HLA-DQA2P01906 255 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 UQCRFS1P1P0C7P4 283 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 TGM2P21980 687 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 GSTM2P28161 218 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 CDKN2AP42771 156 aaKnown RBP2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 EIF3BP55884 814 aaKnown RBP2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 IRX3P78415 501 aaPredicted RBP2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 GSTO1P78417 241 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 EFNB1P98172 346 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 DCTN2Q13561 401 aaKnown RBP2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 ACVR2BQ13705 512 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 IL13RA2Q14627 380 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 KCNB1Q14721 858 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 LARS2Q15031 903 aaKnown RBP2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 C9orf50Q5SZB4 431 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 AADACL2Q6P093 401 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 PDXDC1Q6P996 788 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 ZNF549Q6P9A3 640 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 VSTM1Q6UX27 236 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 RTL10Q7L3V2 364 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 RRM2BQ7LG56 351 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 ANKRD33Q7Z3H0 272 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 VPS52Q8N1B4 723 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 TMTC2Q8N394 836 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 PLD5Q8N7P1 536 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 ACER1Q8TDN7 264 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 C2CD4CQ8TF44 421 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 NR4A3Q92570 626 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 DAZAP1Q96EP5 407 aaKnown RBP2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 LMLNQ96KR4 655 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 HS6ST2Q96MM7 605 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 LBHD1Q9BQE6 289 aaPredicted RBP2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 API5Q9BZZ5 524 aaKnown RBP2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 TRIM2Q9C040 744 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 ERVK-5Q9HDB9 667 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 PLSCR4Q9NRQ2 329 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 SEPT11Q9NVA2 429 aaKnown RBP2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 TMEM248Q9NWD8 314 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 ASNSD1Q9NWL6 643 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 HCFC1R1Q9NWW0 138 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 AATFQ9NY61 560 aaKnown RBP eCLIP2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 TBX21Q9UL17 535 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 DTX4Q9Y2E6 619 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 HEMK1Q9Y5R4 338 aaPredicted RBP2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 SQORQ9Y6N5 450 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 SMG1Q96Q15 3661 aaKnown RBP2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 ASTN1O14525 1302 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 LAMA5O15230 3695 aa2.6□□□□□ -1.99
SMARCB1-208ENST00000634926 SCN5AQ14524 2016 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 SIP14410 1827 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 IGKV6D-41A0A0C4DH26 115 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 TCRBV5S1A1TA0A578 114 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 TMEM247A6NEH6 219 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 H7C1Q1 480 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 AP3D1O14617 1153 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 CTAGE5O15320 804 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 TSPAN9O75954 239 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 PORP16435 677 aaPredicted RBP2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 CDH2P19022 906 aaPredicted RBP2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 CYP2B6P20813 491 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 ICAM3P32942 547 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 CPOXP36551 454 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 PSMB10P40306 273 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 VPS41P49754 854 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 BLKP51451 505 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 DYNLL1P63167 89 aaKnown RBP2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 CREB5Q02930 508 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 SRSF1Q07955 248 aaKnown RBP eCLIP2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 WTAPQ15007 396 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 AP5B1Q2VPB7 878 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms