RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 PCDHA9Q9Y5H5 950 aa4.89□□□□□ -1.63
LINC00550-201ENST00000629293 A0A087WV48 116 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 CDC14CA4D256 554 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 VILLO15195 856 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 GRAP2O75791 330 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 PCDH8O95206 1070 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 SHBGP04278 402 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 MYBL1P10243 752 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 EPHA8P29322 1005 aaPredicted RBP4.88□□□□□ -1.63
LINC00550-201ENST00000629293 HOXC12P31275 282 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 CD68P34810 354 aaPredicted RBP4.88□□□□□ -1.63
LINC00550-201ENST00000629293 RWDD2BP57060 319 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 DAOAP59103 153 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 ECT2LQ008S8 904 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 GBX1Q14549 363 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 DCAF6Q58WW2 860 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 SLC45A4Q5BKX6 768 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 FAM133BQ5BKY9 247 aaKnown RBP4.88□□□□□ -1.63
LINC00550-201ENST00000629293 PITRM1Q5JRX3 1037 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 UBAP2Q5T6F2 1119 aaKnown RBP4.88□□□□□ -1.63
LINC00550-201ENST00000629293 MON1BQ7L1V2 547 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 GPR155Q7Z3F1 870 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 HOOK3Q86VS8 718 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 AADATQ8N5Z0 425 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 FRS2Q8WU20 508 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 CENPTQ96BT3 561 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 PRICKLE1Q96MT3 831 aaPredicted RBP4.88□□□□□ -1.63
LINC00550-201ENST00000629293 CCT8L2Q96SF2 557 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 SARGQ9BW04 601 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 TRIM31Q9BZY9 425 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 SIK2Q9H0K1 926 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 RABEP2Q9H5N1 569 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 EMC7Q9NPA0 242 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 TMEM51Q9NW97 253 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 PCDHGB2Q9Y5G2 931 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 TMEM131Q92545 1883 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 PLXND1Q9Y4D7 1925 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 CPED1A4D0V7 1026 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 ANKRD65E5RJM6 399 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 O00370 1275 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 KLK10O43240 276 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 SIGLEC6O43699 453 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 SPOPO43791 374 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 KCNH1O95259 989 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 IGLV3-19P01714 112 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 APOEP02649 317 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 HPDP32754 393 aaPredicted RBP4.88□□□□□ -1.63
LINC00550-201ENST00000629293 ARL4DP49703 201 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 SEC24CP53992 1094 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 ADPRHP54922 357 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 PLTPP55058 493 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 MAGOHP61326 146 aaKnown RBP4.88□□□□□ -1.63
LINC00550-201ENST00000629293 KRT71Q3SY84 523 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 RAB41Q5JT25 222 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 NADSYN1Q6IA69 706 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 OR6B2Q6IFH4 312 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 PRPF39Q86UA1 669 aaKnown RBP4.88□□□□□ -1.63
LINC00550-201ENST00000629293 DQX1Q8TE96 717 aaKnown RBP4.88□□□□□ -1.63
LINC00550-201ENST00000629293 SAP25Q8TEE9 199 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 TRIM11Q96F44 468 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 RPRD1AQ96P16 312 aaPredicted RBP4.88□□□□□ -1.63
LINC00550-201ENST00000629293 HERPUD2Q9BSE4 406 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 PRDM14Q9GZV8 571 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 PCED1AQ9H1Q7 454 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 RSPH9Q9H1X1 276 aaPredicted RBP4.88□□□□□ -1.63
LINC00550-201ENST00000629293 CNOT10Q9H9A5 744 aaKnown RBP4.88□□□□□ -1.63
LINC00550-201ENST00000629293 TAGLN3Q9UI15 199 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 ERVW-1Q9UQF0 538 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 NEU2Q9Y3R4 380 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 POLQO75417 2590 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 TRPM6Q9BX84 2022 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 EDDM13A0A1B0GTR0 161 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 SHISA8B8ZZ34 492 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 TRIM38O00635 465 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 RIPK2O43353 540 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 USP12O75317 370 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 PPM1BO75688 479 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 SLITRK5O94991 958 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 IVDP26440 423 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 SERPINB3P29508 390 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 SLC1A1P43005 524 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 MMP13P45452 471 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 ACADVLP49748 655 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 CLDN2P57739 230 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 YWHAEP62258 255 aaKnown RBP4.88□□□□□ -1.63
LINC00550-201ENST00000629293 NME3Q13232 169 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 KLF1Q13351 362 aaPredicted RBP4.88□□□□□ -1.63
LINC00550-201ENST00000629293 PCBP2Q15366 365 aaKnown RBP eCLIP4.88□□□□□ -1.63
LINC00550-201ENST00000629293 C3orf38Q5JPI3 329 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 C9orf64Q5T6V5 341 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 SYPL2Q5VXT5 272 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 DENND2CQ68D51 928 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 ARHGAP17Q68EM7 881 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 PM20D1Q6GTS8 502 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 CXorf57Q6NSI4 855 aaKnown RBP4.88□□□□□ -1.63
LINC00550-201ENST00000629293 TRIM72Q6ZMU5 477 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 DBX2Q6ZNG2 339 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 OVCH1Q7RTY7 1134 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 SPACA3Q8IXA5 215 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 TTC39CQ8N584 583 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms