RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 KCNE4Q8WWG9 221 aa17.06■□□□□ 0.32
SPTAN1-214ENST00000628614 CCDC97Q96F63 343 aaPredicted RBP17.06■□□□□ 0.32
SPTAN1-214ENST00000628614 CRELD1Q96HD1 420 aa17.06■□□□□ 0.32
SPTAN1-214ENST00000628614 NAF1Q96HR8 494 aaKnown RBP17.06■□□□□ 0.32
SPTAN1-214ENST00000628614 QKIQ96PU8 341 aaKnown RBP eCLIP17.06■□□□□ 0.32
SPTAN1-214ENST00000628614 VAT1Q99536 393 aa17.06■□□□□ 0.32
SPTAN1-214ENST00000628614 ZSCAN5AQ9BUG6 496 aa17.06■□□□□ 0.32
SPTAN1-214ENST00000628614 GPR63Q9BZJ6 419 aa17.06■□□□□ 0.32
SPTAN1-214ENST00000628614 RMI1Q9H9A7 625 aa17.06■□□□□ 0.32
SPTAN1-214ENST00000628614 NFKBIL1Q9UBC1 381 aaPredicted RBP17.06■□□□□ 0.32
SPTAN1-214ENST00000628614 FAM153AQ9UHL3 310 aa17.06■□□□□ 0.32
SPTAN1-214ENST00000628614 ZNHIT2Q9UHR6 403 aa17.06■□□□□ 0.32
SPTAN1-214ENST00000628614 ATXN7L1Q9ULK2 861 aaPredicted RBP17.06■□□□□ 0.32
SPTAN1-214ENST00000628614 CNOT6Q9ULM6 557 aaKnown RBP17.06■□□□□ 0.32
SPTAN1-214ENST00000628614 SHOC2Q9UQ13 582 aa17.06■□□□□ 0.32
SPTAN1-214ENST00000628614 ZNF711Q9Y462 761 aa17.06■□□□□ 0.32
SPTAN1-214ENST00000628614 OAS3Q9Y6K5 1087 aaKnown RBP17.06■□□□□ 0.32
SPTAN1-214ENST00000628614 BTNL10A8MVZ5 291 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 DNAJC6O75061 913 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 PMPCBO75439 489 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 TNFSF15O95150 251 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 ATP1A1P05023 1023 aaKnown RBP17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 PIRTP0C851 137 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 CD68P34810 354 aaPredicted RBP17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 CTNNA1P35221 906 aaKnown RBP17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 B4GALNT1Q00973 533 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 CLPPQ16740 277 aaPredicted RBP17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 MAP9Q49MG5 647 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 ZNF569Q5MCW4 686 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 BROXQ5VW32 411 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 PDPK2PQ6A1A2 396 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 BBS12Q6ZW61 710 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 TMC3Q7Z5M5 1100 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 CLEC14AQ86T13 490 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 FBXO39Q8N4B4 442 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 PATE1Q8WXA2 126 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 KRT35Q92764 455 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 TMEM159Q96B96 161 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 HAUS1Q96CS2 278 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 EID2BQ96D98 161 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 SPATA16Q9BXB7 569 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 DPH1Q9BZG8 443 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 PRORYQ9H606 182 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 KLHL8Q9P2G9 620 aaPredicted RBP17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 PLEKHM1Q9Y4G2 1056 aa17.05■□□□□ 0.32
SPTAN1-214ENST00000628614 PMS2P1A4D2B8 440 aa17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 RCCD1A6NED2 376 aa17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 APOC4-APOC2K7ER74 178 aa17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 CPNE6O95741 557 aa17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 APOC2P02655 101 aa17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 SLC4A1P02730 911 aa17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 NFKB1P19838 968 aa17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 ALDH4A1P30038 563 aa17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 UCNP55089 124 aa17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 NAP1L1P55209 391 aaKnown RBP17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 ZFP36L1Q07352 338 aaKnown RBP17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 XRCC4Q13426 336 aa17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 CCDC181Q5TID7 509 aa17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 ALS2CLQ60I27 953 aa17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 PIM3Q86V86 326 aa17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 TRAM1L1Q8N609 369 aa17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 GPR26Q8NDV2 337 aa17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 HTR3CQ8WXA8 447 aa17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 FCRL3Q96P31 734 aaPredicted RBP17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 CARD9Q9H257 536 aa17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 UBP1Q9NZI7 540 aa17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 TRHDEQ9UKU6 1024 aa17.04■□□□□ 0.32
SPTAN1-214ENST00000628614 SMG1Q96Q15 3661 aaKnown RBP17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 CCDC66A2RUB6 948 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 GPR89AB7ZAQ6 455 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 B4GAT1O43505 415 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 EPOP01588 193 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 JMJD7P0C870 316 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 GPR89BP0CG08 455 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 UGT1A5P35504 534 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 VAV2P52735 878 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 WNT3AP56704 352 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 OR1D5P58170 312 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 AMZ1Q400G9 498 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 KDELC1Q6UW63 502 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 RAD9BQ6WBX8 426 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 CHST15Q7LFX5 561 aaPredicted RBP17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 PID1Q7Z2X4 250 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 PHYKPLQ8IUZ5 450 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 SLITRK4Q8IW52 837 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 ZNF567Q8N184 647 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 FCRL5Q96RD9 977 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 CMKLR1Q99788 373 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 FERMT1Q9BQL6 677 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 HEMGNQ9BXL5 484 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 TRABDQ9H4I3 376 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 EFR3BQ9Y2G0 817 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 LOXL2Q9Y4K0 774 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 PCDHA3Q9Y5H8 950 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 CACNA1GO43497 2377 aa17.03■□□□□ 0.32
SPTAN1-214ENST00000628614 LOC285095A0A1B0GVY8 99 aa17.02■□□□□ 0.32
SPTAN1-214ENST00000628614 PPM1DO15297 605 aa17.02■□□□□ 0.32
SPTAN1-214ENST00000628614 KLK10O43240 276 aa17.02■□□□□ 0.32
SPTAN1-214ENST00000628614 NUAK1O60285 661 aa17.02■□□□□ 0.32
SPTAN1-214ENST00000628614 SLC25A14O95258 325 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms