RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 FNDC5Q8NAU1 212 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 APPL2Q8NEU8 664 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 UBA3Q8TBC4 463 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 CCDC120Q96HB5 630 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 APOL4Q9BPW4 351 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 USB1Q9BQ65 265 aaKnown RBP7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 TMEM168Q9H0V1 697 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 LHX5Q9H2C1 402 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 OR51B5Q9H339 312 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 MINDY3Q9H8M7 445 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 PTPRHQ9HD43 1115 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 HPS4Q9NQG7 708 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 IL37Q9NZH6 218 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 DTLQ9NZJ0 730 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 DCDC2Q9UHG0 476 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 ZNF112Q9UJU3 913 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 BOLA1Q9Y3E2 137 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 PCDHGA7Q9Y5G6 932 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 KLF2Q9Y5W3 355 aaPredicted RBP7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 SNX5Q9Y5X3 404 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 PMF1-BGLAPU3KQ54 211 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 HMX2A2RU54 273 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 SOWAHBA6NEL2 793 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 ENDOD1O94919 500 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 CHRNA1P02708 482 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 SLC4A1P02730 911 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 IQCF3P0C7M6 154 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 ITGA2P17301 1181 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 CRHBPP24387 322 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 CYP2C18P33260 490 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 RPS9P46781 194 aaKnown RBP7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 ATP5OP48047 213 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 GMPSP49915 693 aaPredicted RBP7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 GPR85P60893 370 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 PTPN11Q06124 597 aaPredicted RBP7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 RIPPLY1Q0D2K3 151 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 IKZF1Q13422 519 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 MFSD13AQ14CX5 517 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 ACOX1Q15067 660 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 CA9Q16790 459 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 CDO1Q16878 200 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 LY6KQ17RY6 165 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 PLEKHG6Q3KR16 790 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 TBCELQ5QJ74 424 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 FAM102AQ5T9C2 384 aaPredicted RBP7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 GARNL3Q5VVW2 1013 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 MAP1SQ66K74 1059 aaPredicted RBP7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 TRMT10BQ6PF06 316 aaKnown RBP7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 MPZL3Q6UWV2 235 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 ARSKQ6UWY0 536 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 CREB3L2Q70SY1 520 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 DPH6Q7L8W6 267 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 CHST15Q7LFX5 561 aaPredicted RBP7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 PTAR1Q7Z6K3 402 aaPredicted RBP7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 DHFR2Q86XF0 187 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 HID1Q8IV36 788 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 MPP5Q8N3R9 675 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 PQLC3Q8N755 202 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 PLD5Q8N7P1 536 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 FAM156AQ8NDB6 213 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 PJA1Q8NG27 643 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 NCLNQ969V3 563 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 FAF2Q96CS3 445 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 UBXN10Q96LJ8 280 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 UROC1Q96N76 676 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 SAMD11Q96NU1 681 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 OR52B2Q96RD2 323 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 TTYH2Q9BSA4 534 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 SLIRPQ9GZT3 109 aaKnown RBP7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 CDT1Q9H211 546 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 MMP27Q9H306 513 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 ZFP14Q9HCL3 533 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 FANCFQ9NPI8 374 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 RAB6BQ9NRW1 208 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 IARS2Q9NSE4 1012 aaKnown RBP7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 SLC17A6Q9P2U8 582 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 CD300AQ9UGN4 299 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 AGAP5A6NIR3 686 aa7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 FAM159BA6NKW6 160 aa7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 ZNF99A8MXY4 864 aaPredicted RBP7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 EI24O14681 340 aa7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 CHADO15335 359 aa7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 KCNN4O15554 427 aa7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 CILPO75339 1184 aa7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 ZBTB7AO95365 584 aa7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 HSPA4LO95757 839 aa7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 TNNC2P02585 160 aa7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 HMGCRP04035 888 aa7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 IL10P22301 178 aa7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 PTX3P26022 381 aaPredicted RBP7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 IL12RB1P42701 662 aa7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 CLK1P49759 484 aaKnown RBP7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 SEPHS1P49903 392 aa7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 EFNA5P52803 228 aa7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 MAPK12P53778 367 aa7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 GP2P55259 537 aaKnown RBP7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 PRKCDQ05655 676 aa7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 MGAT3Q09327 533 aa7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 SEMA3BQ13214 749 aa7.46□□□□□ -1.21
TRIM49B-202ENST00000622138 GPR50Q13585 617 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms