RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 ANKS3Q6ZW76 656 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 HOMEZQ8IX15 550 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 SFRP1Q8N474 314 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 SLC2A14Q8TDB8 520 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 NSMCE3Q96MG7 304 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 GPR22Q99680 433 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 PARVBQ9HBI1 364 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 TMLHEQ9NVH6 421 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 MYO9BQ13459 2157 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 NRP2O60462 931 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 SEC24DO94855 1032 aaPredicted RBP21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 CXCL14O95715 111 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 RB1P06400 928 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 MATN1P21941 496 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 PSMA4P25789 261 aaKnown RBP21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 KCNJ8Q15842 424 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 BROXQ5VW32 411 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 LCN8Q6JVE9 175 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 PIWIL4Q7Z3Z4 852 aaKnown RBP21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 CYGBQ8WWM9 190 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 ZNF669Q96BR6 464 aaPredicted RBP21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 SH3YL1Q96HL8 342 aaPredicted RBP21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 VPS39Q96JC1 886 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 PGLYRP2Q96PD5 576 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 MUC13Q9H3R2 512 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 MRPL17Q9NRX2 175 aaKnown RBP21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 RCOR3Q9P2K3 495 aaPredicted RBP21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 ANKMY1Q9P2S6 941 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 KLHL3Q9UH77 587 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 MTF2Q9Y483 593 aaPredicted RBP21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 MYO7AQ13402 2215 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 TRANK1O15050 2925 aa21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 MAGEB16A2A368 324 aa21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 H3BNC9 293 aa21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 TK2O00142 265 aa21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 CLDN5O00501 218 aa21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 RSL1D1O76021 490 aaKnown RBP21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 UGT2B4P06133 528 aa21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 GPIP06744 558 aa21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 ATP6V1B2P21281 511 aa21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 PCSK1P29120 753 aa21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 DNAJB13P59910 316 aa21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 CBX2Q14781 532 aaPredicted RBP21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 SLC39A12Q504Y0 691 aa21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 PRPF38BQ5VTL8 546 aaKnown RBP21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 NCBP2-AS2Q69YL0 99 aa21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 LCLAT1Q6UWP7 414 aa21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 CADM3Q8N126 398 aa21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 HMGCLL1Q8TB92 370 aa21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 SAMD11Q96NU1 681 aa21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 ACBD6Q9BR61 282 aa21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 MEAF6Q9HAF1 191 aa21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 TLR9Q9NR96 1032 aa21.85■■□□□ 1.09
POLR2J3-220ENST00000613744 HIDE1A8MVS5 230 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 SOX1O00570 391 aaPredicted RBP21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 UBDO15205 165 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 ACOX3O15254 700 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 DNAJB5O75953 348 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 CTSAP10619 480 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 HSD17B1P14061 328 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 OR1D2P34982 312 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 PTPN9P43378 593 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 SLC12A1Q13621 1099 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 NEDD8Q15843 81 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 LRIT3Q3SXY7 679 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 AGKQ53H12 422 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 TFAP2DQ7Z6R9 452 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 ABHD11Q8NFV4 315 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 SPPL2BQ8TCT7 592 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 LRRN4Q8WUT4 740 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 CSPG4P5Q96PW8 444 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 HOPXQ9BPY8 73 aaPredicted RBP21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 MED10Q9BTT4 135 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 MUC3BQ9H195 1237 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 CAB39LQ9H9S4 337 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 GMIPQ9P107 970 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 IFT80Q9P2H3 777 aaPredicted RBP21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 CDH9Q9ULB4 789 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 ZCWPW2A0A1B0GU75 182 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 LSM1O15116 133 aaKnown RBP21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 CPB1P15086 417 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 CCR10P46092 362 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 SNX16P57768 344 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 DLG2Q15700 870 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 INTS6LQ5JSJ4 861 aaKnown RBP21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 PARP8Q8N3A8 854 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 MYRFLQ96LU7 910 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 CLSTN3Q9BQT9 956 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 ZNF576Q9H609 170 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 BFARQ9NZS9 450 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 ABCD2Q9UBJ2 740 aa21.84■■□□□ 1.09
POLR2J3-220ENST00000613744 H7C4K7 107 aa21.83■■□□□ 1.09
POLR2J3-220ENST00000613744 RNF103O00237 685 aa21.83■■□□□ 1.09
POLR2J3-220ENST00000613744 ADARB1P78563 741 aaKnown RBP21.83■■□□□ 1.09
POLR2J3-220ENST00000613744 TSPY1Q01534 308 aa21.83■■□□□ 1.09
POLR2J3-220ENST00000613744 CYBRD1Q53TN4 286 aa21.83■■□□□ 1.09
POLR2J3-220ENST00000613744 GTF2IRD2BQ6EKJ0 949 aa21.83■■□□□ 1.09
POLR2J3-220ENST00000613744 GTF2IRD2Q86UP8 949 aa21.83■■□□□ 1.09
POLR2J3-220ENST00000613744 ZDHHC17Q8IUH5 632 aa21.83■■□□□ 1.09
POLR2J3-220ENST00000613744 SNX19Q92543 992 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms