RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 MN1Q10571 1320 aaPredicted RBP9.16□□□□□ -0.94
CTCFL-220ENST00000608858 TSPAN11A1L157 253 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 CFAP69A5D8W1 941 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 TRIM49BA6NDI0 452 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 C19orf84I3L1E1 186 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 J3KR12 359 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 YEATS4O95619 227 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 IVLP07476 585 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 DRD2P14416 443 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 FLT3P36888 993 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 PRCPP42785 496 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 GPR1P46091 355 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 ART1P52961 327 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 PDE1BQ01064 536 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 APBA1Q02410 837 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 ATP1A4Q13733 1029 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 LAMB3Q13751 1172 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 CDO1Q16878 200 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 SMTNL2Q2TAL5 461 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 INO80DQ53TQ3 878 aaPredicted RBP9.16□□□□□ -0.94
CTCFL-220ENST00000608858 PRAMEF17Q5VTA0 474 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 TRNP1Q6NT89 227 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 Q71RC1 249 aaPredicted RBP9.16□□□□□ -0.94
CTCFL-220ENST00000608858 SLC9B2Q86UD5 537 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 ENDOVQ8N8Q3 282 aaKnown RBP9.16□□□□□ -0.94
CTCFL-220ENST00000608858 SLC38A9Q8NBW4 561 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 TSEN2Q8NCE0 465 aaKnown RBP9.16□□□□□ -0.94
CTCFL-220ENST00000608858 ADAMTS17Q8TE56 1095 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 NT5C3BQ969T7 300 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 SH3KBP1Q96B97 665 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 BARD1Q99728 777 aaKnown RBP9.16□□□□□ -0.94
CTCFL-220ENST00000608858 MDFIQ99750 246 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 SARS2Q9NP81 518 aaKnown RBP9.16□□□□□ -0.94
CTCFL-220ENST00000608858 TMEM248Q9NWD8 314 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 CPNE7Q9UBL6 633 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 B4GALT6Q9UBX8 382 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 USP25Q9UHP3 1055 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 CNTN6Q9UQ52 1028 aa9.16□□□□□ -0.94
CTCFL-220ENST00000608858 ZNF469Q96JG9 3925 aaPredicted RBP9.16□□□□□ -0.94
CTCFL-220ENST00000608858 A0A1B0GUH1 482 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 UBXN7O94888 489 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 LRIG2O94898 1065 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 ATP1A1P05023 1023 aaKnown RBP9.15□□□□□ -0.94
CTCFL-220ENST00000608858 PFKFB1P16118 471 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 ADRA1BP35368 520 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 MAPKAPK2P49137 400 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 KCNK10P57789 538 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 BCL2L1Q07817 233 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 CUL4AQ13619 759 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 CNGA3Q16281 694 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 HIF1AQ16665 826 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 ZNF630Q2M218 657 aaPredicted RBP9.15□□□□□ -0.94
CTCFL-220ENST00000608858 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.15□□□□□ -0.94
CTCFL-220ENST00000608858 FAM102AQ5T9C2 384 aaPredicted RBP9.15□□□□□ -0.94
CTCFL-220ENST00000608858 IRGCQ6NXR0 463 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 DUS1LQ6P1R4 473 aaKnown RBP9.15□□□□□ -0.94
CTCFL-220ENST00000608858 THSD4Q6ZMP0 1018 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 DPPA4Q7L190 304 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 HPS6Q86YV9 775 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 GALNT13Q8IUC8 556 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 PYROXD2Q8N2H3 581 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 ZADH2Q8N4Q0 377 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 EMC1Q8N766 993 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 ZNF397Q8NF99 534 aaPredicted RBP9.15□□□□□ -0.94
CTCFL-220ENST00000608858 SEC14L1Q92503 715 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 PGAP3Q96FM1 320 aaPredicted RBP9.15□□□□□ -0.94
CTCFL-220ENST00000608858 SGSM3Q96HU1 749 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 AGAP2Q99490 1192 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 STN1Q9H668 368 aaKnown RBP9.15□□□□□ -0.94
CTCFL-220ENST00000608858 ATP13A3Q9H7F0 1226 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 PDE7BQ9NP56 450 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 CHST11Q9NPF2 352 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 SEMA3GQ9NS98 782 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 SCHIP1Q9P0W5 487 aaPredicted RBP9.15□□□□□ -0.94
CTCFL-220ENST00000608858 SH3BGRL2Q9UJC5 107 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 RARRES3Q9UL19 164 aa9.15□□□□□ -0.94
CTCFL-220ENST00000608858 KLF2Q9Y5W3 355 aaPredicted RBP9.15□□□□□ -0.94
CTCFL-220ENST00000608858 IGHV5-51A0A0C4DH38 117 aa9.14□□□□□ -0.95
CTCFL-220ENST00000608858 GOLGA6L3A6NEY3 463 aa9.14□□□□□ -0.95
CTCFL-220ENST00000608858 BECN2A8MW95 431 aa9.14□□□□□ -0.95
CTCFL-220ENST00000608858 E2F3O00716 465 aa9.14□□□□□ -0.95
CTCFL-220ENST00000608858 SLC16A3O15427 465 aaKnown RBP9.14□□□□□ -0.95
CTCFL-220ENST00000608858 C9P02748 559 aa9.14□□□□□ -0.95
CTCFL-220ENST00000608858 STSP08842 583 aa9.14□□□□□ -0.95
CTCFL-220ENST00000608858 ANKRD34CP0C6C1 535 aa9.14□□□□□ -0.95
CTCFL-220ENST00000608858 EBLN1P0CF75 366 aa9.14□□□□□ -0.95
CTCFL-220ENST00000608858 ACP5P13686 325 aa9.14□□□□□ -0.95
CTCFL-220ENST00000608858 SERPINA4P29622 427 aa9.14□□□□□ -0.95
CTCFL-220ENST00000608858 OTX2P32243 289 aa9.14□□□□□ -0.95
CTCFL-220ENST00000608858 KRT9P35527 623 aa9.14□□□□□ -0.95
CTCFL-220ENST00000608858 SCNN1BP51168 640 aa9.14□□□□□ -0.95
CTCFL-220ENST00000608858 VAV2P52735 878 aa9.14□□□□□ -0.95
CTCFL-220ENST00000608858 PPP1CAP62136 330 aa9.14□□□□□ -0.95
CTCFL-220ENST00000608858 POLR2LP62875 67 aaKnown RBP9.14□□□□□ -0.95
CTCFL-220ENST00000608858 FKBP3Q00688 224 aaKnown RBP9.14□□□□□ -0.95
CTCFL-220ENST00000608858 GCNT1Q02742 428 aa9.14□□□□□ -0.95
CTCFL-220ENST00000608858 CETN1Q12798 172 aa9.14□□□□□ -0.95
CTCFL-220ENST00000608858 GPS2Q13227 327 aa9.14□□□□□ -0.95
CTCFL-220ENST00000608858 TUBB3Q13509 450 aa9.14□□□□□ -0.95
CTCFL-220ENST00000608858 C15orf59Q2T9L4 293 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms