RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 GPR3P46089 330 aa23.29■■□□□ 1.32
LSM4-204ENST00000594828 PRKD1Q15139 912 aaPredicted RBP23.29■■□□□ 1.32
LSM4-204ENST00000594828 SLC14A2Q15849 920 aa23.29■■□□□ 1.32
LSM4-204ENST00000594828 MAP9Q49MG5 647 aa23.29■■□□□ 1.32
LSM4-204ENST00000594828 CCDC70Q6NSX1 233 aa23.29■■□□□ 1.32
LSM4-204ENST00000594828 USP53Q70EK8 1073 aa23.29■■□□□ 1.32
LSM4-204ENST00000594828 TMPRSS9Q7Z410 1059 aa23.29■■□□□ 1.32
LSM4-204ENST00000594828 RCOR2Q8IZ40 523 aa23.29■■□□□ 1.32
LSM4-204ENST00000594828 SPATA22Q8NHS9 363 aa23.29■■□□□ 1.32
LSM4-204ENST00000594828 EID2BQ96D98 161 aa23.29■■□□□ 1.32
LSM4-204ENST00000594828 TEKT5Q96M29 485 aa23.29■■□□□ 1.32
LSM4-204ENST00000594828 CMKLR1Q99788 373 aa23.29■■□□□ 1.32
LSM4-204ENST00000594828 LUC7LQ9NQ29 371 aaKnown RBP23.29■■□□□ 1.32
LSM4-204ENST00000594828 TFR2Q9UP52 801 aa23.29■■□□□ 1.32
LSM4-204ENST00000594828 SHOC2Q9UQ13 582 aa23.29■■□□□ 1.32
LSM4-204ENST00000594828 PRKAB1Q9Y478 270 aa23.29■■□□□ 1.32
LSM4-204ENST00000594828 PCDHGA7Q9Y5G6 932 aa23.29■■□□□ 1.32
LSM4-204ENST00000594828 UNC13CQ8NB66 2214 aa23.28■■□□□ 1.32
LSM4-204ENST00000594828 A0A0A6YYK5 440 aaPredicted RBP23.28■■□□□ 1.32
LSM4-204ENST00000594828 AGRPO00253 132 aa23.28■■□□□ 1.32
LSM4-204ENST00000594828 PPM1DO15297 605 aa23.28■■□□□ 1.32
LSM4-204ENST00000594828 MT-CYBP00156 380 aaPredicted RBP23.28■■□□□ 1.32
LSM4-204ENST00000594828 PIRTP0C851 137 aa23.28■■□□□ 1.32
LSM4-204ENST00000594828 PTPN3P26045 913 aa23.28■■□□□ 1.32
LSM4-204ENST00000594828 SLC5A2P31639 672 aa23.28■■□□□ 1.32
LSM4-204ENST00000594828 CYLC1P35663 651 aaPredicted RBP23.28■■□□□ 1.32
LSM4-204ENST00000594828 COL9A2Q14055 689 aaPredicted RBP23.28■■□□□ 1.32
LSM4-204ENST00000594828 CLPPQ16740 277 aaPredicted RBP23.28■■□□□ 1.32
LSM4-204ENST00000594828 TFDP3Q5H9I0 405 aa23.28■■□□□ 1.32
LSM4-204ENST00000594828 PHF19Q5T6S3 580 aa23.28■■□□□ 1.32
LSM4-204ENST00000594828 CHST15Q7LFX5 561 aaPredicted RBP23.28■■□□□ 1.32
LSM4-204ENST00000594828 JAMLQ86YT9 394 aa23.28■■□□□ 1.32
LSM4-204ENST00000594828 SLITRK4Q8IW52 837 aa23.28■■□□□ 1.32
LSM4-204ENST00000594828 KATNAL2Q8IYT4 538 aa23.28■■□□□ 1.32
LSM4-204ENST00000594828 P3H4Q92791 437 aa23.28■■□□□ 1.32
LSM4-204ENST00000594828 SEMA6CQ9H3T2 930 aa23.28■■□□□ 1.32
LSM4-204ENST00000594828 RMI1Q9H9A7 625 aa23.28■■□□□ 1.32
LSM4-204ENST00000594828 CPNE5Q9HCH3 593 aa23.28■■□□□ 1.32
LSM4-204ENST00000594828 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.28■■□□□ 1.32
LSM4-204ENST00000594828 PISDQ9UG56 409 aa23.28■■□□□ 1.32
LSM4-204ENST00000594828 PMPCBO75439 489 aa23.27■■□□□ 1.32
LSM4-204ENST00000594828 PECAM1P16284 738 aaPredicted RBP23.27■■□□□ 1.32
LSM4-204ENST00000594828 ADCY2Q08462 1091 aa23.27■■□□□ 1.32
LSM4-204ENST00000594828 TMC3Q7Z5M5 1100 aa23.27■■□□□ 1.32
LSM4-204ENST00000594828 SPATA16Q9BXB7 569 aa23.27■■□□□ 1.32
LSM4-204ENST00000594828 GPR63Q9BZJ6 419 aa23.27■■□□□ 1.32
LSM4-204ENST00000594828 RAD18Q9NS91 495 aa23.27■■□□□ 1.32
LSM4-204ENST00000594828 UBP1Q9NZI7 540 aa23.27■■□□□ 1.32
LSM4-204ENST00000594828 SSUH2Q9Y2M2 353 aa23.27■■□□□ 1.32
LSM4-204ENST00000594828 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.27■■□□□ 1.32
LSM4-204ENST00000594828 PCYT1BQ9Y5K3 369 aaPredicted RBP23.27■■□□□ 1.32
LSM4-204ENST00000594828 TRBV23OR9-2A0A075B6M9 112 aa23.26■■□□□ 1.31
LSM4-204ENST00000594828 NDST3O95803 873 aa23.26■■□□□ 1.31
LSM4-204ENST00000594828 CD1CP29017 333 aa23.26■■□□□ 1.31
LSM4-204ENST00000594828 ARHGAP40Q5TG30 622 aa23.26■■□□□ 1.31
LSM4-204ENST00000594828 ALS2CLQ60I27 953 aa23.26■■□□□ 1.31
LSM4-204ENST00000594828 ZC3H18Q86VM9 953 aaKnown RBP23.26■■□□□ 1.31
LSM4-204ENST00000594828 CCDC50Q8IVM0 306 aa23.26■■□□□ 1.31
LSM4-204ENST00000594828 GPR26Q8NDV2 337 aa23.26■■□□□ 1.31
LSM4-204ENST00000594828 SRPK1Q96SB4 655 aaKnown RBP23.26■■□□□ 1.31
LSM4-204ENST00000594828 NUDT22Q9BRQ3 303 aa23.26■■□□□ 1.31
LSM4-204ENST00000594828 ZNF711Q9Y462 761 aa23.26■■□□□ 1.31
LSM4-204ENST00000594828 hCG_1818297A0A087WSY0 165 aa23.25■■□□□ 1.31
LSM4-204ENST00000594828 ATXN7O15265 892 aaPredicted RBP23.25■■□□□ 1.31
LSM4-204ENST00000594828 NVLO15381 856 aaKnown RBP23.25■■□□□ 1.31
LSM4-204ENST00000594828 MTSS1O43312 755 aa23.25■■□□□ 1.31
LSM4-204ENST00000594828 SLC25A14O95258 325 aaPredicted RBP23.25■■□□□ 1.31
LSM4-204ENST00000594828 SLC4A1P02730 911 aa23.25■■□□□ 1.31
LSM4-204ENST00000594828 ITIH1P19827 911 aa23.25■■□□□ 1.31
LSM4-204ENST00000594828 ZNF75DP51815 510 aa23.25■■□□□ 1.31
LSM4-204ENST00000594828 DCDC1P59894 354 aa23.25■■□□□ 1.31
LSM4-204ENST00000594828 WASHC5Q12768 1159 aa23.25■■□□□ 1.31
LSM4-204ENST00000594828 C11orf63Q6NUN7 778 aa23.25■■□□□ 1.31
LSM4-204ENST00000594828 ZNF574Q6ZN55 896 aaPredicted RBP23.25■■□□□ 1.31
LSM4-204ENST00000594828 DAAM2Q86T65 1068 aa23.25■■□□□ 1.31
LSM4-204ENST00000594828 RBM41Q96IZ5 413 aaKnown RBP23.25■■□□□ 1.31
LSM4-204ENST00000594828 ZSCAN5AQ9BUG6 496 aa23.25■■□□□ 1.31
LSM4-204ENST00000594828 CARD9Q9H257 536 aa23.25■■□□□ 1.31
LSM4-204ENST00000594828 KCNK4Q9NYG8 393 aa23.25■■□□□ 1.31
LSM4-204ENST00000594828 AKAP7Q9P0M2 348 aaPredicted RBP23.25■■□□□ 1.31
LSM4-204ENST00000594828 EPN1Q9Y6I3 576 aaPredicted RBP23.25■■□□□ 1.31
LSM4-204ENST00000594828 IGHV1OR21-1A0A087WYE8 117 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 GRID2O43424 1007 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 NUAK1O60285 661 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 CD68P34810 354 aaPredicted RBP23.24■■□□□ 1.31
LSM4-204ENST00000594828 FASLGP48023 281 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 MARCKSL1P49006 195 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 VAC14Q08AM6 782 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 CLN3Q13286 438 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 ZNF569Q5MCW4 686 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 NKAIN2Q5VXU1 208 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 SFRP1Q8N474 314 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 TRAM1L1Q8N609 369 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 LSM14AQ8ND56 463 aaKnown RBP23.24■■□□□ 1.31
LSM4-204ENST00000594828 SLC37A2Q8TED4 501 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 HAUS1Q96CS2 278 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 MRFAP1L1Q96HT8 127 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 PANX2Q96RD6 677 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 TRIM39Q9HCM9 518 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 ARFGAP3Q9NP61 516 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms