RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 CYP4F12Q9HCS2 524 aa25.57■■□□□ 1.68
TRIM28-204ENST00000594806 CASS4Q9NQ75 786 aa25.57■■□□□ 1.68
TRIM28-204ENST00000594806 TRNAU1APQ9NX07 287 aaKnown RBP25.57■■□□□ 1.68
TRIM28-204ENST00000594806 PCYOX1Q9UHG3 505 aa25.57■■□□□ 1.68
TRIM28-204ENST00000594806 MOSPD1Q9UJG1 213 aa25.57■■□□□ 1.68
TRIM28-204ENST00000594806 ZNF106Q9H2Y7 1883 aaKnown RBP25.56■■□□□ 1.68
TRIM28-204ENST00000594806 GLYATL1P3A0A0U1RQE8 302 aa25.56■■□□□ 1.68
TRIM28-204ENST00000594806 CCDC188H7C350 402 aa25.56■■□□□ 1.68
TRIM28-204ENST00000594806 INPP4BO15327 924 aa25.56■■□□□ 1.68
TRIM28-204ENST00000594806 LDB2O43679 373 aa25.56■■□□□ 1.68
TRIM28-204ENST00000594806 SLC25A14O95258 325 aaPredicted RBP25.56■■□□□ 1.68
TRIM28-204ENST00000594806 ECEL1O95672 775 aa25.56■■□□□ 1.68
TRIM28-204ENST00000594806 LDOC1O95751 146 aaPredicted RBP25.56■■□□□ 1.68
TRIM28-204ENST00000594806 TUBB4AP04350 444 aa25.56■■□□□ 1.68
TRIM28-204ENST00000594806 ANXA6P08133 673 aa25.56■■□□□ 1.68
TRIM28-204ENST00000594806 NYAP1Q6ZVC0 841 aa25.56■■□□□ 1.68
TRIM28-204ENST00000594806 PHYKPLQ8IUZ5 450 aa25.56■■□□□ 1.68
TRIM28-204ENST00000594806 FAM181AQ8N9Y4 354 aa25.56■■□□□ 1.68
TRIM28-204ENST00000594806 OR4K2Q8NGD2 314 aa25.56■■□□□ 1.68
TRIM28-204ENST00000594806 OR52K1Q8NGK4 314 aa25.56■■□□□ 1.68
TRIM28-204ENST00000594806 CARS2Q9HA77 564 aaKnown RBP25.56■■□□□ 1.68
TRIM28-204ENST00000594806 TRIM39Q9HCM9 518 aa25.56■■□□□ 1.68
TRIM28-204ENST00000594806 MRPL40Q9NQ50 206 aaKnown RBP25.56■■□□□ 1.68
TRIM28-204ENST00000594806 EVA1BQ9NVM1 165 aa25.56■■□□□ 1.68
TRIM28-204ENST00000594806 NCKIPSDQ9NZQ3 722 aa25.56■■□□□ 1.68
TRIM28-204ENST00000594806 NEU2Q9Y3R4 380 aa25.56■■□□□ 1.68
TRIM28-204ENST00000594806 GOLGA4Q13439 2230 aaKnown RBP25.56■■□□□ 1.68
TRIM28-204ENST00000594806 FANCGO15287 622 aa25.55■■□□□ 1.68
TRIM28-204ENST00000594806 ASMTLO95671 621 aa25.55■■□□□ 1.68
TRIM28-204ENST00000594806 GIMD1P0DJR0 217 aa25.55■■□□□ 1.68
TRIM28-204ENST00000594806 TPH1P17752 444 aa25.55■■□□□ 1.68
TRIM28-204ENST00000594806 MAGEA6P43360 314 aa25.55■■□□□ 1.68
TRIM28-204ENST00000594806 ZNF140P52738 457 aaPredicted RBP25.55■■□□□ 1.68
TRIM28-204ENST00000594806 SARNPP82979 210 aaKnown RBP25.55■■□□□ 1.68
TRIM28-204ENST00000594806 GPS1Q13098 491 aa25.55■■□□□ 1.68
TRIM28-204ENST00000594806 PEX6Q13608 980 aa25.55■■□□□ 1.68
TRIM28-204ENST00000594806 SYT10Q6XYQ8 523 aa25.55■■□□□ 1.68
TRIM28-204ENST00000594806 STYXQ8WUJ0 223 aa25.55■■□□□ 1.68
TRIM28-204ENST00000594806 CNDP2Q96KP4 475 aaKnown RBP25.55■■□□□ 1.68
TRIM28-204ENST00000594806 RANBP9Q96S59 729 aa25.55■■□□□ 1.68
TRIM28-204ENST00000594806 RIMKLBQ9ULI2 386 aa25.55■■□□□ 1.68
TRIM28-204ENST00000594806 SUFUQ9UMX1 484 aa25.55■■□□□ 1.68
TRIM28-204ENST00000594806 DOLKQ9UPQ8 538 aa25.55■■□□□ 1.68
TRIM28-204ENST00000594806 ZCCHC8Q6NZY4 707 aaKnown RBP25.54■■□□□ 1.68
TRIM28-204ENST00000594806 NLRP9Q7RTR0 991 aa25.54■■□□□ 1.68
TRIM28-204ENST00000594806 CLPBQ9H078 707 aa25.54■■□□□ 1.68
TRIM28-204ENST00000594806 SMOXQ9NWM0 555 aa25.54■■□□□ 1.68
TRIM28-204ENST00000594806 TMEM98Q9Y2Y6 226 aa25.54■■□□□ 1.68
TRIM28-204ENST00000594806 HEATR9A2RTY3 570 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 H7C0S8 307 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 TRIM38O00635 465 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 GIPC1O14908 333 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 FFAR2O15552 330 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 SIGLEC6O43699 453 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 BUD23O43709 281 aaKnown RBP25.53■■□□□ 1.68
TRIM28-204ENST00000594806 VEGFDO43915 354 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 ADRA1DP25100 572 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 PSMA3P25788 255 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 SIM1P81133 766 aaPredicted RBP25.53■■□□□ 1.68
TRIM28-204ENST00000594806 C1orf61Q13536 156 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 POU6F1Q14863 301 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 TRIP13Q15645 432 aaPredicted RBP25.53■■□□□ 1.68
TRIM28-204ENST00000594806 CHRNA6Q15825 494 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 SKIDA1Q1XH10 827 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 PROX2Q3B8N5 592 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 ATP13A5Q4VNC0 1218 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 LDLRAP1Q5SW96 308 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 ARMC3Q5W041 872 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 DOK6Q6PKX4 331 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 FAM151BQ6UXP7 276 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 SYDE1Q6ZW31 735 aaPredicted RBP25.53■■□□□ 1.68
TRIM28-204ENST00000594806 TRIM74Q86UV6 250 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 ZNF398Q8TD17 642 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 PEX13Q92968 403 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 GLMNQ92990 594 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 GSDMCQ9BYG8 508 aa25.53■■□□□ 1.68
TRIM28-204ENST00000594806 DDX47Q9H0S4 455 aaKnown RBP25.53■■□□□ 1.68
TRIM28-204ENST00000594806 NLE1Q9NVX2 485 aaPredicted RBP25.53■■□□□ 1.68
TRIM28-204ENST00000594806 APOBEC2Q9Y235 224 aaKnown RBP25.53■■□□□ 1.68
TRIM28-204ENST00000594806 MROH6A6NGR9 719 aa25.52■■□□□ 1.68
TRIM28-204ENST00000594806 YY2O15391 372 aa25.52■■□□□ 1.68
TRIM28-204ENST00000594806 FUCA1P04066 466 aa25.52■■□□□ 1.68
TRIM28-204ENST00000594806 CDK4P11802 303 aa25.52■■□□□ 1.68
TRIM28-204ENST00000594806 CKMT2P17540 419 aa25.52■■□□□ 1.68
TRIM28-204ENST00000594806 GNPDA1P46926 289 aa25.52■■□□□ 1.68
TRIM28-204ENST00000594806 POLD2P49005 469 aa25.52■■□□□ 1.68
TRIM28-204ENST00000594806 NPY2RP49146 381 aa25.52■■□□□ 1.68
TRIM28-204ENST00000594806 ILF3Q12906 894 aaKnown RBP eCLIP25.52■■□□□ 1.68
TRIM28-204ENST00000594806 LRP8Q14114 963 aa25.52■■□□□ 1.68
TRIM28-204ENST00000594806 PPP1R7Q15435 360 aa25.52■■□□□ 1.68
TRIM28-204ENST00000594806 PYCR3Q53H96 274 aa25.52■■□□□ 1.68
TRIM28-204ENST00000594806 KCTD16Q68DU8 428 aa25.52■■□□□ 1.68
TRIM28-204ENST00000594806 GALNT13Q8IUC8 556 aa25.52■■□□□ 1.68
TRIM28-204ENST00000594806 GPBAR1Q8TDU6 330 aa25.52■■□□□ 1.68
TRIM28-204ENST00000594806 OR2M4Q96R27 311 aa25.52■■□□□ 1.68
TRIM28-204ENST00000594806 TMEM168Q9H0V1 697 aa25.52■■□□□ 1.68
TRIM28-204ENST00000594806 KCTD3Q9Y597 815 aa25.52■■□□□ 1.68
TRIM28-204ENST00000594806 OAS3Q9Y6K5 1087 aaKnown RBP25.52■■□□□ 1.68
TRIM28-204ENST00000594806 DNAH14Q0VDD8 3507 aa25.52■■□□□ 1.68
TRIM28-204ENST00000594806 MYLKQ15746 1914 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms