RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 PYCR3Q53H96 274 aa11.99□□□□□ -0.49
TPM4-212ENST00000590180 ANKRD20A2Q5SQ80 823 aa11.99□□□□□ -0.49
TPM4-212ENST00000590180 ZNF648Q5T619 568 aaPredicted RBP11.99□□□□□ -0.49
TPM4-212ENST00000590180 HENMT1Q5T8I9 393 aaKnown RBP11.99□□□□□ -0.49
TPM4-212ENST00000590180 ANKRD20A1Q5TYW2 823 aa11.99□□□□□ -0.49
TPM4-212ENST00000590180 ANKRD20A3Q5VUR7 823 aa11.99□□□□□ -0.49
TPM4-212ENST00000590180 RBM44Q6ZP01 1051 aaKnown RBP11.99□□□□□ -0.49
TPM4-212ENST00000590180 NRROSQ86YC3 692 aa11.99□□□□□ -0.49
TPM4-212ENST00000590180 TTC13Q8NBP0 860 aa11.99□□□□□ -0.49
TPM4-212ENST00000590180 CCDC112Q8NEF3 446 aa11.99□□□□□ -0.49
TPM4-212ENST00000590180 WDR48Q8TAF3 677 aa11.99□□□□□ -0.49
TPM4-212ENST00000590180 BLOC1S5Q8TDH9 187 aa11.99□□□□□ -0.49
TPM4-212ENST00000590180 SCARF2Q96GP6 870 aaPredicted RBP11.99□□□□□ -0.49
TPM4-212ENST00000590180 COX14Q96I36 57 aa11.99□□□□□ -0.49
TPM4-212ENST00000590180 FSD1LQ9BXM9 530 aa11.99□□□□□ -0.49
TPM4-212ENST00000590180 CDH19Q9H159 772 aa11.99□□□□□ -0.49
TPM4-212ENST00000590180 ARFGAP3Q9NP61 516 aa11.99□□□□□ -0.49
TPM4-212ENST00000590180 LRIT1Q9P2V4 623 aa11.99□□□□□ -0.49
TPM4-212ENST00000590180 RABGEF1Q9UJ41 708 aa11.99□□□□□ -0.49
TPM4-212ENST00000590180 PRKAB1Q9Y478 270 aa11.99□□□□□ -0.49
TPM4-212ENST00000590180 OAS3Q9Y6K5 1087 aaKnown RBP11.99□□□□□ -0.49
TPM4-212ENST00000590180 CAPN6Q9Y6Q1 641 aa11.99□□□□□ -0.49
TPM4-212ENST00000590180 ARHGEF17Q96PE2 2063 aaPredicted RBP11.99□□□□□ -0.49
TPM4-212ENST00000590180 FRYQ5TBA9 3013 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 RHPN2P1A8MT19 583 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 RPLP0P05388 317 aaKnown RBP11.98□□□□□ -0.49
TPM4-212ENST00000590180 GLB1P16278 677 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 BPIP17213 487 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 HLA-DPA1P20036 260 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 RTP5Q14D33 572 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 SLC1A5Q15758 541 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 ZNF569Q5MCW4 686 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 FOXR1Q6PIV2 292 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 CHST15Q7LFX5 561 aaPredicted RBP11.98□□□□□ -0.49
TPM4-212ENST00000590180 LRRC8AQ8IWT6 810 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 ARL14Q8N4G2 192 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 TRAM1L1Q8N609 369 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 CCDC110Q8TBZ0 833 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 HES6Q96HZ4 224 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 GFM1Q96RP9 751 aaKnown RBP11.98□□□□□ -0.49
TPM4-212ENST00000590180 APOL2Q9BQE5 337 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 ZSCAN5AQ9BUG6 496 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 FICDQ9BVA6 458 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 OR2AG1Q9H205 316 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 GBA3Q9H227 469 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 LRRN3Q9H3W5 708 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 TRABDQ9H4I3 376 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 TRIM39Q9HCM9 518 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 LZTFL1Q9NQ48 299 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 HACD3Q9P035 362 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 RAXQ9Y2V3 346 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 AAR2Q9Y312 384 aaKnown RBP11.98□□□□□ -0.49
TPM4-212ENST00000590180 RNF215Q9Y6U7 377 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 MYLKQ15746 1914 aa11.98□□□□□ -0.49
TPM4-212ENST00000590180 GRID2O43424 1007 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 BUD23O43709 281 aaKnown RBP11.97□□□□□ -0.49
TPM4-212ENST00000590180 NRDCO43847 1150 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 TCEA3O75764 348 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 ECEL1O95672 775 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 MPOP05164 745 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 PSMB4P28070 264 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 HMGCLP35914 325 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 MAZP56270 477 aaKnown RBP11.97□□□□□ -0.49
TPM4-212ENST00000590180 HLTFQ14527 1009 aaKnown RBP eCLIP11.97□□□□□ -0.49
TPM4-212ENST00000590180 RPS6KA1Q15418 735 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 CERCAMQ5T4B2 595 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 SEL1L2Q5TEA6 688 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 ARHGEF18Q6ZSZ5 1173 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 GLT6D1Q7Z4J2 308 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 CCNJLQ8IV13 435 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 FAM71DQ8N9W8 422 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 GDAP1Q8TB36 358 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 GLYATL1Q969I3 302 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 ATXN7L3BQ96GX2 97 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 SPATA13Q96N96 652 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 RMI1Q9H9A7 625 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 VPS18Q9P253 973 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 ATXN10Q9UBB4 475 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 DKK4Q9UBT3 224 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 ST14Q9Y5Y6 855 aa11.97□□□□□ -0.49
TPM4-212ENST00000590180 A0A1W2PQM1 296 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 TCRBV7S2A1N4TA0A589 114 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 C5orf60A6NFR6 353 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 TMX2-CTNND1H3BSU7 103 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 NTN3O00634 580 aaPredicted RBP11.96□□□□□ -0.49
TPM4-212ENST00000590180 STX7O15400 261 aaKnown RBP11.96□□□□□ -0.49
TPM4-212ENST00000590180 ZW10O43264 779 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 NUDT21O43809 227 aaKnown RBP11.96□□□□□ -0.49
TPM4-212ENST00000590180 NUAK1O60285 661 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 BRINP1O60477 761 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 SNX2O60749 519 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 DNAJC6O75061 913 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 MTX2O75431 263 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 ZNF189O75820 626 aaPredicted RBP11.96□□□□□ -0.49
TPM4-212ENST00000590180 CCDC175P0C221 793 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 ACP5P13686 325 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 PNLIPP16233 465 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 ZNF8P17098 575 aaPredicted RBP11.96□□□□□ -0.49
TPM4-212ENST00000590180 ALDH4A1P30038 563 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 ACTN2P35609 894 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms