RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 PEX6Q13608 980 aa20.27■□□□□ 0.84
SS18-224ENST00000584083 PYCR3Q53H96 274 aa20.27■□□□□ 0.84
SS18-224ENST00000584083 SIRPB2Q5JXA9 342 aa20.27■□□□□ 0.84
SS18-224ENST00000584083 CERCAMQ5T4B2 595 aa20.27■□□□□ 0.84
SS18-224ENST00000584083 ITPRIPL1Q6GPH6 555 aa20.27■□□□□ 0.84
SS18-224ENST00000584083 GPR26Q8NDV2 337 aa20.27■□□□□ 0.84
SS18-224ENST00000584083 LRIT1Q9P2V4 623 aa20.27■□□□□ 0.84
SS18-224ENST00000584083 PLEKHM1Q9Y4G2 1056 aa20.27■□□□□ 0.84
SS18-224ENST00000584083 OAS3Q9Y6K5 1087 aaKnown RBP20.27■□□□□ 0.84
SS18-224ENST00000584083 RNF215Q9Y6U7 377 aa20.27■□□□□ 0.84
SS18-224ENST00000584083 AURKAO14965 403 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 KCNN4O15554 427 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 MPOP05164 745 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 RPLP0P05388 317 aaKnown RBP20.26■□□□□ 0.83
SS18-224ENST00000584083 ACTR1BP42025 376 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 CHRNA4P43681 627 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 MAZP56270 477 aaKnown RBP20.26■□□□□ 0.83
SS18-224ENST00000584083 DCDC1P59894 354 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 ACTR1AP61163 376 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 GABREP78334 506 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 MPP3Q13368 585 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 HLTFQ14527 1009 aaKnown RBP eCLIP20.26■□□□□ 0.83
SS18-224ENST00000584083 ZNF569Q5MCW4 686 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 CCNJLQ8IV13 435 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 GRAMD1AQ96CP6 724 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 ATXN7L3BQ96GX2 97 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 MRGPRX2Q96LB1 330 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 GFM1Q96RP9 751 aaKnown RBP20.26■□□□□ 0.83
SS18-224ENST00000584083 ZSCAN5AQ9BUG6 496 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 FSD1LQ9BXM9 530 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 GBA3Q9H227 469 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 LRRN3Q9H3W5 708 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 VPS18Q9P253 973 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 PRKAB1Q9Y478 270 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 ENTPD2Q9Y5L3 495 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 ST14Q9Y5Y6 855 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 SCN8AQ9UQD0 1980 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 WDFY3Q8IZQ1 3526 aa20.26■□□□□ 0.83
SS18-224ENST00000584083 GOLGA6L9A6NEM1 432 aa20.25■□□□□ 0.83
SS18-224ENST00000584083 NTN3O00634 580 aaPredicted RBP20.25■□□□□ 0.83
SS18-224ENST00000584083 ANXA9O76027 345 aa20.25■□□□□ 0.83
SS18-224ENST00000584083 SLC25A14O95258 325 aaPredicted RBP20.25■□□□□ 0.83
SS18-224ENST00000584083 BPIP17213 487 aa20.25■□□□□ 0.83
SS18-224ENST00000584083 GEMP55040 296 aa20.25■□□□□ 0.83
SS18-224ENST00000584083 RNF10Q8N5U6 811 aaKnown RBP20.25■□□□□ 0.83
SS18-224ENST00000584083 TRAM1L1Q8N609 369 aa20.25■□□□□ 0.83
SS18-224ENST00000584083 DCBLD2Q96PD2 775 aa20.25■□□□□ 0.83
SS18-224ENST00000584083 TSGA10Q9BZW7 698 aa20.25■□□□□ 0.83
SS18-224ENST00000584083 TRABDQ9H4I3 376 aa20.25■□□□□ 0.83
SS18-224ENST00000584083 POLR1BQ9H9Y6 1135 aa20.25■□□□□ 0.83
SS18-224ENST00000584083 BPIFA1Q9NP55 256 aa20.25■□□□□ 0.83
SS18-224ENST00000584083 ARFGAP3Q9NP61 516 aa20.25■□□□□ 0.83
SS18-224ENST00000584083 APPL1Q9UKG1 709 aa20.25■□□□□ 0.83
SS18-224ENST00000584083 ADGRG1Q9Y653 693 aa20.25■□□□□ 0.83
SS18-224ENST00000584083 CAPN6Q9Y6Q1 641 aa20.25■□□□□ 0.83
SS18-224ENST00000584083 PKD1L2Q7Z442 2459 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 RHPN2P1A8MT19 583 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 DDX3YO15523 660 aaKnown RBP20.24■□□□□ 0.83
SS18-224ENST00000584083 NUDT21O43809 227 aaKnown RBP20.24■□□□□ 0.83
SS18-224ENST00000584083 ECEL1O95672 775 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 PNLIPP16233 465 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 HLA-DPA1P20036 260 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 ACTN2P35609 894 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 LSSP48449 732 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 LRP8Q14114 963 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 PRPSAP1Q14558 356 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 SLC1A5Q15758 541 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 C3orf38Q5JPI3 329 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 ANKRD20A2Q5SQ80 823 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 ANKRD20A1Q5TYW2 823 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 ANKRD20A3Q5VUR7 823 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 C19orf48Q6RUI8 117 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 CHST15Q7LFX5 561 aaPredicted RBP20.24■□□□□ 0.83
SS18-224ENST00000584083 BLOC1S5Q8TDH9 187 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 RMI1Q9H9A7 625 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 HACD3Q9P035 362 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 NFKBIL1Q9UBC1 381 aaPredicted RBP20.24■□□□□ 0.83
SS18-224ENST00000584083 GUCA1BQ9UMX6 200 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 SATB2Q9UPW6 733 aa20.24■□□□□ 0.83
SS18-224ENST00000584083 A0A1W2PQM1 296 aa20.23■□□□□ 0.83
SS18-224ENST00000584083 KRT86O43790 486 aa20.23■□□□□ 0.83
SS18-224ENST00000584083 DNAJC6O75061 913 aa20.23■□□□□ 0.83
SS18-224ENST00000584083 ZNF648Q5T619 568 aaPredicted RBP20.23■□□□□ 0.83
SS18-224ENST00000584083 PDPK2PQ6A1A2 396 aa20.23■□□□□ 0.83
SS18-224ENST00000584083 FOXR1Q6PIV2 292 aa20.23■□□□□ 0.83
SS18-224ENST00000584083 SPRED1Q7Z699 444 aa20.23■□□□□ 0.83
SS18-224ENST00000584083 LSMEM2Q8N112 164 aa20.23■□□□□ 0.83
SS18-224ENST00000584083 ARL14Q8N4G2 192 aa20.23■□□□□ 0.83
SS18-224ENST00000584083 TTC13Q8NBP0 860 aa20.23■□□□□ 0.83
SS18-224ENST00000584083 HNRNPLLQ8WVV9 542 aaKnown RBP20.23■□□□□ 0.83
SS18-224ENST00000584083 PATE1Q8WXA2 126 aa20.23■□□□□ 0.83
SS18-224ENST00000584083 FGF11Q92914 225 aa20.23■□□□□ 0.83
SS18-224ENST00000584083 GLYATL1Q969I3 302 aa20.23■□□□□ 0.83
SS18-224ENST00000584083 FICDQ9BVA6 458 aa20.23■□□□□ 0.83
SS18-224ENST00000584083 OR2AG1Q9H205 316 aa20.23■□□□□ 0.83
SS18-224ENST00000584083 TRIM39Q9HCM9 518 aa20.23■□□□□ 0.83
SS18-224ENST00000584083 ATXN10Q9UBB4 475 aa20.23■□□□□ 0.83
SS18-224ENST00000584083 ADAMTS20P59510 1910 aa20.23■□□□□ 0.83
SS18-224ENST00000584083 D6RAR5 112 aa20.22■□□□□ 0.83
SS18-224ENST00000584083 ARHGAP6O43182 974 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms