RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 AADATQ8N5Z0 425 aa8□□□□□ -1.13
COPS3-215ENST00000578317 PAF1Q8N7H5 531 aa8□□□□□ -1.13
COPS3-215ENST00000578317 GSDMBQ8TAX9 411 aa8□□□□□ -1.13
COPS3-215ENST00000578317 EID2BQ96D98 161 aa8□□□□□ -1.13
COPS3-215ENST00000578317 PKNOX2Q96KN3 472 aa8□□□□□ -1.13
COPS3-215ENST00000578317 ZNF778Q96MU6 729 aa8□□□□□ -1.13
COPS3-215ENST00000578317 FCRL3Q96P31 734 aaPredicted RBP8□□□□□ -1.13
COPS3-215ENST00000578317 GPR63Q9BZJ6 419 aa8□□□□□ -1.13
COPS3-215ENST00000578317 CDH19Q9H159 772 aa8□□□□□ -1.13
COPS3-215ENST00000578317 EPB41L4BQ9H329 900 aa8□□□□□ -1.13
COPS3-215ENST00000578317 NLE1Q9NVX2 485 aaPredicted RBP8□□□□□ -1.13
COPS3-215ENST00000578317 FBXL12Q9NXK8 326 aa8□□□□□ -1.13
COPS3-215ENST00000578317 KCTD5Q9NXV2 234 aa8□□□□□ -1.13
COPS3-215ENST00000578317 B4GALT6Q9UBX8 382 aa8□□□□□ -1.13
COPS3-215ENST00000578317 FETUBQ9UGM5 382 aa8□□□□□ -1.13
COPS3-215ENST00000578317 EBF1Q9UH73 591 aa8□□□□□ -1.13
COPS3-215ENST00000578317 CHMP2BQ9UQN3 213 aa8□□□□□ -1.13
COPS3-215ENST00000578317 ZNF711Q9Y462 761 aa8□□□□□ -1.13
COPS3-215ENST00000578317 FADS3Q9Y5Q0 445 aa8□□□□□ -1.13
COPS3-215ENST00000578317 TICRRQ7Z2Z1 1910 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 C1orf232A0A0U1RR37 186 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 C10orf142B7Z368 130 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 J3QW42 95 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 STX7O15400 261 aaKnown RBP7.99□□□□□ -1.13
COPS3-215ENST00000578317 BANF1O75531 89 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 TCEA3O75764 348 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 CLDN7O95471 211 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 C1QAP02745 245 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 ALPIP09923 528 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 NUDT17P0C025 328 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 PIRTP0C851 137 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 GABRG2P18507 467 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 PAMP19021 973 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 AOC1P19801 751 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 LHCGRP22888 699 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 NMBRP28336 390 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 SSTR1P30872 391 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 PHBP35232 272 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 HSD17B3P37058 310 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 MMP12P39900 470 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 ARCN1P48444 511 aaKnown RBP7.99□□□□□ -1.13
COPS3-215ENST00000578317 PSMD8P48556 350 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 ZNF140P52738 457 aaPredicted RBP7.99□□□□□ -1.13
COPS3-215ENST00000578317 STC1P52823 247 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 METAP1P53582 386 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 TAS2R38P59533 333 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 FAM193AP78312 1265 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 RALGDSQ12967 914 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 SLC29A2Q14542 456 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 CRYMQ14894 314 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 UAP1Q16222 522 aaPredicted RBP7.99□□□□□ -1.13
COPS3-215ENST00000578317 CNGA3Q16281 694 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 TTC31Q49AM3 519 aaPredicted RBP7.99□□□□□ -1.13
COPS3-215ENST00000578317 HP1BP3Q5SSJ5 553 aaPredicted RBP7.99□□□□□ -1.13
COPS3-215ENST00000578317 LCE2AQ5TA79 106 aaPredicted RBP7.99□□□□□ -1.13
COPS3-215ENST00000578317 DENND2CQ68D51 928 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 KIAA0930Q6ICG6 404 aaPredicted RBP7.99□□□□□ -1.13
COPS3-215ENST00000578317 LIPIQ6XZB0 460 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 GLT6D1Q7Z4J2 308 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 BMP8AQ7Z5Y6 402 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 RASSF3Q86WH2 238 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 LMNTD2Q8IXW0 634 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 NRSN1Q8IZ57 195 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 OR13J1Q8NGT2 312 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 ASB12Q8WXK4 309 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 MFSD3Q96ES6 412 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 CDKN2AIPNLQ96HQ2 116 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 SMIM14Q96QK8 99 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 MFSD1Q9H3U5 465 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 RAD18Q9NS91 495 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 USP36Q9P275 1121 aaKnown RBP7.99□□□□□ -1.13
COPS3-215ENST00000578317 NFKBIL1Q9UBC1 381 aaPredicted RBP7.99□□□□□ -1.13
COPS3-215ENST00000578317 KLF15Q9UIH9 416 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 NCKAP1Q9Y2A7 1128 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 PKP3Q9Y446 797 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 ARL5AQ9Y689 179 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 KIAA1549LQ6ZVL6 1849 aa7.99□□□□□ -1.13
COPS3-215ENST00000578317 A0A087WUV0 522 aaPredicted RBP7.98□□□□□ -1.13
COPS3-215ENST00000578317 CCDC163A0A0D9SF12 145 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 TCRBV9S1A1TA0A576 114 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 TCRBV21S2A2A0A5A6 115 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 ATP8B1O43520 1251 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 PLRG1O43660 514 aaKnown RBP7.98□□□□□ -1.13
COPS3-215ENST00000578317 ZNF217O75362 1048 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 SMNDC1O75940 238 aaKnown RBP eCLIP7.98□□□□□ -1.13
COPS3-215ENST00000578317 APBB3O95704 486 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 PRKCGP05129 697 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 ACADMP11310 421 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 ARNTP27540 789 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 OXTRP30559 389 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 CXCL12P48061 93 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 SPINT3P49223 89 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 CCR3P51677 355 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 MTAPQ13126 283 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 ARHGEF7Q14155 803 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 PTPRRQ15256 657 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 RASA2Q15283 850 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 LONRF1Q17RB8 773 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 ALS2CLQ60I27 953 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 LRRC66Q68CR7 880 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms