RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 MARC1Q5VT66 337 aa13.23□□□□□ -0.29
COPS3-214ENST00000577246 LRRC66Q68CR7 880 aa13.23□□□□□ -0.29
COPS3-214ENST00000577246 TRIM74Q86UV6 250 aa13.23□□□□□ -0.29
COPS3-214ENST00000577246 RASGRP3Q8IV61 690 aa13.23□□□□□ -0.29
COPS3-214ENST00000577246 APLFQ8IW19 511 aaPredicted RBP13.23□□□□□ -0.29
COPS3-214ENST00000577246 MCOLN2Q8IZK6 566 aa13.23□□□□□ -0.29
COPS3-214ENST00000577246 FNIP1Q8TF40 1166 aa13.23□□□□□ -0.29
COPS3-214ENST00000577246 COX14Q96I36 57 aa13.23□□□□□ -0.29
COPS3-214ENST00000577246 C9orf72Q96LT7 481 aa13.23□□□□□ -0.29
COPS3-214ENST00000577246 NSMCE3Q96MG7 304 aa13.23□□□□□ -0.29
COPS3-214ENST00000577246 PCMTD1Q96MG8 357 aaPredicted RBP13.23□□□□□ -0.29
COPS3-214ENST00000577246 KCTD15Q96SI1 283 aaPredicted RBP13.23□□□□□ -0.29
COPS3-214ENST00000577246 AGPAT1Q99943 283 aa13.23□□□□□ -0.29
COPS3-214ENST00000577246 UCK1Q9HA47 277 aa13.23□□□□□ -0.29
COPS3-214ENST00000577246 SAMSN1Q9NSI8 373 aaKnown RBP13.23□□□□□ -0.29
COPS3-214ENST00000577246 CPNE7Q9UBL6 633 aa13.23□□□□□ -0.29
COPS3-214ENST00000577246 TBC1D29Q9UFV1 150 aa13.23□□□□□ -0.29
COPS3-214ENST00000577246 PCSK1NQ9UHG2 260 aa13.23□□□□□ -0.29
COPS3-214ENST00000577246 TLK1Q9UKI8 766 aa13.23□□□□□ -0.29
COPS3-214ENST00000577246 PCDHGA6Q9Y5G7 932 aa13.23□□□□□ -0.29
COPS3-214ENST00000577246 OAS3Q9Y6K5 1087 aaKnown RBP13.23□□□□□ -0.29
COPS3-214ENST00000577246 TTC24A2A3L6 582 aaPredicted RBP13.22□□□□□ -0.29
COPS3-214ENST00000577246 PIPSLA2A3N6 862 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 C21orf140B9A014 251 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 H3BRJ5 948 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 SNX2O60749 519 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 DNAJC6O75061 913 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 CREG1O75629 220 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 NDUFA10O95299 355 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 EML2O95834 649 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 C9P02748 559 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 ATP1A3P13637 1013 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 CTPS1P17812 591 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 CA4P22748 312 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 F8A1P23610 371 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 VARSP26640 1264 aaKnown RBP13.22□□□□□ -0.29
COPS3-214ENST00000577246 SERPINB6P35237 376 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 ARL4AP40617 200 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 MMP13P45452 471 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 PGDP52209 483 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 EPHB1P54762 984 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 CDH6P55285 790 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 ACAD10Q6JQN1 1059 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 TMCO3Q6UWJ1 677 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 ATPAF2Q8N5M1 289 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 GALNT6Q8NCL4 622 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 NEK11Q8NG66 645 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 THAP4Q8WY91 577 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 SCAMP4Q969E2 229 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 PADI1Q9ULC6 663 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 NOTCH2Q04721 2471 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 NBASA2RRP1 2371 aa13.22□□□□□ -0.29
COPS3-214ENST00000577246 ARHGEF17Q96PE2 2063 aaPredicted RBP13.22□□□□□ -0.29
COPS3-214ENST00000577246 K7EM74 188 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 RASSF9O75901 435 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 KIAA0754O94854 1291 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 ACP5P13686 325 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 AMD1P17707 334 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 KLK7P49862 253 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 OGDHQ02218 1023 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 PTSQ03393 145 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 MAMLD1Q13495 774 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 SEMA5AQ13591 1074 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 DNASE1L3Q13609 305 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 DPYSQ14117 519 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 HIST2H2BCQ6DN03 193 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 TRIM48Q8IWZ4 208 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 PGBD5Q8N414 524 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 PIH1D2Q8WWB5 315 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 OR6C1Q96RD1 312 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 RIOK2Q9BVS4 552 aaKnown RBP13.21□□□□□ -0.29
COPS3-214ENST00000577246 TBC1D10AQ9BXI6 508 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 SLC29A3Q9BZD2 475 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 ZNF768Q9H5H4 540 aaKnown RBP13.21□□□□□ -0.29
COPS3-214ENST00000577246 CWC15Q9P013 229 aaKnown RBP13.21□□□□□ -0.29
COPS3-214ENST00000577246 LNPEPQ9UIQ6 1025 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 KCNK6Q9Y257 313 aa13.21□□□□□ -0.29
COPS3-214ENST00000577246 SPTAN1Q13813 2472 aaKnown RBP13.21□□□□□ -0.29
COPS3-214ENST00000577246 NBPF19A0A087WUL8 3843 aa13.2□□□□□ -0.3
COPS3-214ENST00000577246 A0A0J9YYE9 177 aa13.2□□□□□ -0.3
COPS3-214ENST00000577246 A6NCN8 305 aa13.2□□□□□ -0.3
COPS3-214ENST00000577246 GOLGA6L3A6NEY3 463 aa13.2□□□□□ -0.3
COPS3-214ENST00000577246 EPHB6O15197 1021 aa13.2□□□□□ -0.3
COPS3-214ENST00000577246 MAFKO60675 156 aa13.2□□□□□ -0.3
COPS3-214ENST00000577246 LRCH4O75427 683 aa13.2□□□□□ -0.3
COPS3-214ENST00000577246 UBXN7O94888 489 aa13.2□□□□□ -0.3
COPS3-214ENST00000577246 PEX11BO96011 259 aa13.2□□□□□ -0.3
COPS3-214ENST00000577246 TRBC1P01850 177 aa13.2□□□□□ -0.3
COPS3-214ENST00000577246 ATP1A1P05023 1023 aaKnown RBP13.2□□□□□ -0.3
COPS3-214ENST00000577246 FURINP09958 794 aa13.2□□□□□ -0.3
COPS3-214ENST00000577246 ZNF28P17035 718 aa13.2□□□□□ -0.3
COPS3-214ENST00000577246 TNFAIP3P21580 790 aa13.2□□□□□ -0.3
COPS3-214ENST00000577246 CES1P23141 567 aa13.2□□□□□ -0.3
COPS3-214ENST00000577246 MIPP30301 263 aa13.2□□□□□ -0.3
COPS3-214ENST00000577246 CLCNKAP51800 687 aa13.2□□□□□ -0.3
COPS3-214ENST00000577246 STC1P52823 247 aa13.2□□□□□ -0.3
COPS3-214ENST00000577246 MAXP61244 160 aa13.2□□□□□ -0.3
COPS3-214ENST00000577246 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.2□□□□□ -0.3
COPS3-214ENST00000577246 PPP1R3BQ86XI6 285 aa13.2□□□□□ -0.3
COPS3-214ENST00000577246 LRRC49Q8IUZ0 686 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms