RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 RPL10P27635 214 aaKnown RBP17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 AXLP30530 894 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 EPHX2P34913 555 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 PRKCQQ04759 706 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 GK3PQ14409 553 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 MED22Q15528 200 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 INAQ16352 499 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 FAM187BQ17R55 369 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 C9orf131Q5VYM1 1079 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 CLEC20AQ6ZU45 233 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 GATA6Q92908 595 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 KANSL3Q9P2N6 904 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 KDM4FA0A1W2PPD8 638 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 IQCA1LA6NCM1 817 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 E9PAM4 449 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 ENPP3O14638 875 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 TYMPP19971 482 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 PRKACGP22612 351 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 AZGP1P25311 298 aaKnown RBP17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 CASP9P55211 416 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 PPIL2Q13356 520 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 TSTD2Q5T7W7 516 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 PAQR3Q6TCH7 311 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 SLC47A1Q96FL8 570 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 HMCESQ96FZ2 354 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 FAM210AQ96ND0 272 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 ARL5AQ9Y689 179 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 STYXL1Q9Y6J8 313 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 PLSCR1O15162 318 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 EPN2O95208 641 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 ALDH2P05091 517 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 RRM2P31350 389 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 GPR180Q86V85 440 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 DEPDC7Q96QD5 511 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 IFT80Q9P2H3 777 aaPredicted RBP17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 IKZF3Q9UKT9 509 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 PCDHB7Q9Y5E2 793 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 LPOP22079 712 aaPredicted RBP17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 BLVRAP53004 296 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 SLC10A7Q0GE19 358 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 SYT16Q17RD7 645 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 CHSY3Q70JA7 882 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 UBE2J2Q8N2K1 259 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 CIPCQ9C0C6 399 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 MIEF1Q9NQG6 463 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 TAF1P21675 1872 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 NWD2Q9ULI1 1742 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 hCG_2039718K7EN88 272 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 BCAS2O75934 225 aaPredicted RBP17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 EDN1P05305 212 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 CYP2C18P33260 490 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 TPTEP56180 551 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 ACAP2Q15057 778 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 IQSEC1Q6DN90 963 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 TOP6BLQ8N6T0 577 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 AMER2Q8N7J2 671 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 NODALQ96S42 347 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 TNFRSF21O75509 655 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 HLA-DQB2P05538 268 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 MAPK1P28482 360 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 GLUD2P49448 558 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 DIO3P55073 304 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 PIGFQ07326 219 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 LCP2Q13094 533 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 ARMC12Q5T9G4 340 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 TRIM69Q86WT6 500 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 IPPKQ9H8X2 491 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 RMI1Q9H9A7 625 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 PSMD11O00231 422 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 SNPHO15079 494 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 PKMP14618 531 aaKnown RBP17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 IL7RP16871 459 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 CAPGP40121 348 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 HNF4AP41235 474 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 ZNF549Q6P9A3 640 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 ERI1Q8IV48 349 aaKnown RBP17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 ZC3H7AQ8IWR0 971 aaKnown RBP17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 PRDM16Q9HAZ2 1276 aa17.79■□□□□ 0.44
ATPAF1-214ENST00000576409 H0Y858 1186 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 MATN3O15232 486 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 HMGCS1Q01581 520 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 TAF10Q12962 218 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 MAD2L1Q13257 205 aaPredicted RBP17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 FAM174BQ3ZCQ3 159 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 PDZK1Q5T2W1 519 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 SNX27Q96L92 541 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 MOCS1Q9NZB8 636 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 CDC14AQ9UNH5 594 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 LRRC14BA6NHZ5 514 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 ARPC2O15144 300 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 POU2F1P14859 743 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 GATAD2AQ86YP4 633 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 MARCH7Q9H992 704 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 GMIPQ9P107 970 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 TNPO3Q9Y5L0 923 aaKnown RBP17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 PIPSLA2A3N6 862 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 HTRA2O43464 458 aaPredicted RBP17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 ITPKAP23677 461 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms