RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 PCDHGB7Q9Y5F8 929 aa8.92□□□□□ -0.98
SMG6-218ENST00000575454 PCDHGA9Q9Y5G4 932 aaKnown RBP8.92□□□□□ -0.98
SMG6-218ENST00000575454 MRPS18BQ9Y676 258 aaKnown RBP8.92□□□□□ -0.98
SMG6-218ENST00000575454 OAS3Q9Y6K5 1087 aaKnown RBP8.92□□□□□ -0.98
SMG6-218ENST00000575454 NPIPB15A6NHN6 443 aaPredicted RBP8.91□□□□□ -0.98
SMG6-218ENST00000575454 SEMA7AO75326 666 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 NDUFA10O95299 355 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 PGLSO95336 258 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 SOD1P00441 154 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 C9P02748 559 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 F3P13726 295 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 JAM2P57087 298 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 POLR2FP61218 127 aaKnown RBP8.91□□□□□ -0.98
SMG6-218ENST00000575454 SLC10A7Q0GE19 358 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 DNASE1L3Q13609 305 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 CT47A1Q5JQC4 288 aaPredicted RBP8.91□□□□□ -0.98
SMG6-218ENST00000575454 MON1BQ7L1V2 547 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 CHST15Q7LFX5 561 aaPredicted RBP8.91□□□□□ -0.98
SMG6-218ENST00000575454 BPHLQ86WA6 291 aaPredicted RBP8.91□□□□□ -0.98
SMG6-218ENST00000575454 PPP1R3BQ86XI6 285 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 PHYKPLQ8IUZ5 450 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 ZDHHC12Q96GR4 267 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 COX14Q96I36 57 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 FCRL4Q96PJ5 515 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 OR6C1Q96RD1 312 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 PCDHB18PQ96TA0 734 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 MGME1Q9BQP7 344 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 SLC25A23Q9BV35 468 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 ABCG8Q9H221 673 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 ZNF768Q9H5H4 540 aaKnown RBP8.91□□□□□ -0.98
SMG6-218ENST00000575454 ZWILCHQ9H900 591 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 SEPT11Q9NVA2 429 aaKnown RBP8.91□□□□□ -0.98
SMG6-218ENST00000575454 PARVAQ9NVD7 372 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 HAUS2Q9NVX0 235 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 CPNE7Q9UBL6 633 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 TBC1D29Q9UFV1 150 aa8.91□□□□□ -0.98
SMG6-218ENST00000575454 NYNRINQ9P2P1 1898 aaKnown RBP8.91□□□□□ -0.98
SMG6-218ENST00000575454 TDRD6O60522 2096 aaKnown RBP8.9□□□□□ -0.98
SMG6-218ENST00000575454 TCRBV5S1A1TA0A578 114 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 RGSL1A5PLK6 1076 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 A6NCN8 305 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 PRPSAP2O60256 369 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 SNX2O60749 519 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 SPAG6O75602 509 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 RASSF9O75901 435 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 KRT38O76015 456 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 RNF8O76064 485 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 KIAA0754O94854 1291 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 UBXN7O94888 489 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 EML2O95834 649 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 CCDC172P0C7W6 258 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 FGF5P12034 268 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 ZNF28P17035 718 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 AMD1P17707 334 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 CES1P23141 567 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 PSMA2P25787 234 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 CLCNKAP51800 687 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 EPHB1P54762 984 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 CDH6P55285 790 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 RPL7AP62424 266 aaKnown RBP8.9□□□□□ -0.98
SMG6-218ENST00000575454 TRAF2Q12933 501 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 INPP5JQ15735 1006 aaPredicted RBP8.9□□□□□ -0.98
SMG6-218ENST00000575454 CAMK4Q16566 473 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 TCP11X2Q5H9J9 407 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 FKBP15Q5T1M5 1219 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 MARC1Q5VT66 337 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 PAPD7Q5XG87 772 aaKnown RBP8.9□□□□□ -0.98
SMG6-218ENST00000575454 LRRC66Q68CR7 880 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 ARHGAP36Q6ZRI8 547 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 TSPAN33Q86UF1 283 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 TRIM74Q86UV6 250 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 LRRC49Q8IUZ0 686 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 RBM12BQ8IXT5 1001 aaKnown RBP8.9□□□□□ -0.98
SMG6-218ENST00000575454 NPWQ8N729 165 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 PIH1D2Q8WWB5 315 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 SCAMP4Q969E2 229 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 NSMCE3Q96MG7 304 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 TBC1D10AQ9BXI6 508 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 GANQ9H2C0 597 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 PDE7BQ9NP56 450 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 LHX9Q9NQ69 397 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 CASS4Q9NQ75 786 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 FAM207AQ9NSI2 230 aaPredicted RBP8.9□□□□□ -0.98
SMG6-218ENST00000575454 GPATCH2LQ9NWQ4 482 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 CD84Q9UIB8 345 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 LNPEPQ9UIQ6 1025 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 ZNF451Q9Y4E5 1061 aa8.9□□□□□ -0.98
SMG6-218ENST00000575454 KIF26BQ2KJY2 2108 aa8.9□□□□□ -0.99
SMG6-218ENST00000575454 DOCK9Q9BZ29 2069 aa8.9□□□□□ -0.99
SMG6-218ENST00000575454 ZFHX3Q15911 3703 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 A1L4Q6 167 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 TTC24A2A3L6 582 aaPredicted RBP8.89□□□□□ -0.99
SMG6-218ENST00000575454 GPR89AB7ZAQ6 455 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 DPM1O60762 260 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 DNAJC6O75061 913 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 SORBS2O94875 1100 aaKnown RBP8.89□□□□□ -0.99
SMG6-218ENST00000575454 PEX11BO96011 259 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 VIPP01282 170 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 PDGFAP04085 211 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 FURINP09958 794 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms