RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 SCARF2Q96GP6 870 aaPredicted RBP20.51■□□□□ 0.87
CHMP6-204ENST00000572778 OR2M4Q96R27 311 aa20.51■□□□□ 0.87
CHMP6-204ENST00000572778 TBL1YQ9BQ87 522 aa20.51■□□□□ 0.87
CHMP6-204ENST00000572778 ARFGAP3Q9NP61 516 aa20.51■□□□□ 0.87
CHMP6-204ENST00000572778 NFKBIL1Q9UBC1 381 aaPredicted RBP20.51■□□□□ 0.87
CHMP6-204ENST00000572778 ZNHIT2Q9UHR6 403 aa20.51■□□□□ 0.87
CHMP6-204ENST00000572778 PKP3Q9Y446 797 aa20.51■□□□□ 0.87
CHMP6-204ENST00000572778 OPA1O60313 960 aa20.5■□□□□ 0.87
CHMP6-204ENST00000572778 SLC25A14O95258 325 aaPredicted RBP20.5■□□□□ 0.87
CHMP6-204ENST00000572778 IFNB1P01574 187 aa20.5■□□□□ 0.87
CHMP6-204ENST00000572778 FGGP02679 453 aa20.5■□□□□ 0.87
CHMP6-204ENST00000572778 AK4P27144 223 aaPredicted RBP20.5■□□□□ 0.87
CHMP6-204ENST00000572778 INSM1Q01101 510 aaPredicted RBP20.5■□□□□ 0.87
CHMP6-204ENST00000572778 CTBSQ01459 385 aa20.5■□□□□ 0.87
CHMP6-204ENST00000572778 P3H1Q32P28 736 aa20.5■□□□□ 0.87
CHMP6-204ENST00000572778 PYCR3Q53H96 274 aa20.5■□□□□ 0.87
CHMP6-204ENST00000572778 PERM1Q5SV97 790 aa20.5■□□□□ 0.87
CHMP6-204ENST00000572778 PDPK2PQ6A1A2 396 aa20.5■□□□□ 0.87
CHMP6-204ENST00000572778 SLC30A9Q6PML9 568 aa20.5■□□□□ 0.87
CHMP6-204ENST00000572778 NRROSQ86YC3 692 aa20.5■□□□□ 0.87
CHMP6-204ENST00000572778 MAIP1Q8WWC4 291 aa20.5■□□□□ 0.87
CHMP6-204ENST00000572778 GATA6Q92908 595 aa20.5■□□□□ 0.87
CHMP6-204ENST00000572778 NAT6Q93015 286 aa20.5■□□□□ 0.87
CHMP6-204ENST00000572778 GLYATL1Q969I3 302 aa20.5■□□□□ 0.87
CHMP6-204ENST00000572778 PLEKHG4BQ96PX9 1271 aa20.5■□□□□ 0.87
CHMP6-204ENST00000572778 SPATS2LQ9NUQ6 558 aaKnown RBP20.5■□□□□ 0.87
CHMP6-204ENST00000572778 TRMT1Q9NXH9 659 aaKnown RBP20.5■□□□□ 0.87
CHMP6-204ENST00000572778 IL17CQ9P0M4 197 aa20.5■□□□□ 0.87
CHMP6-204ENST00000572778 VPS18Q9P253 973 aa20.5■□□□□ 0.87
CHMP6-204ENST00000572778 PRKAB1Q9Y478 270 aa20.5■□□□□ 0.87
CHMP6-204ENST00000572778 PLEKHM1Q9Y4G2 1056 aa20.5■□□□□ 0.87
CHMP6-204ENST00000572778 STX7O15400 261 aaKnown RBP20.49■□□□□ 0.87
CHMP6-204ENST00000572778 SPAM1P38567 509 aa20.49■□□□□ 0.87
CHMP6-204ENST00000572778 LONRF2Q1L5Z9 754 aa20.49■□□□□ 0.87
CHMP6-204ENST00000572778 ZNF648Q5T619 568 aaPredicted RBP20.49■□□□□ 0.87
CHMP6-204ENST00000572778 ZDHHC20Q5W0Z9 365 aa20.49■□□□□ 0.87
CHMP6-204ENST00000572778 OGFOD3Q6PK18 319 aa20.49■□□□□ 0.87
CHMP6-204ENST00000572778 PHYKPLQ8IUZ5 450 aa20.49■□□□□ 0.87
CHMP6-204ENST00000572778 RTP4Q96DX8 246 aa20.49■□□□□ 0.87
CHMP6-204ENST00000572778 PDLIM2Q96JY6 352 aa20.49■□□□□ 0.87
CHMP6-204ENST00000572778 LRRC40Q9H9A6 602 aa20.49■□□□□ 0.87
CHMP6-204ENST00000572778 TAAR2Q9P1P5 351 aa20.49■□□□□ 0.87
CHMP6-204ENST00000572778 JRKLQ9Y4A0 524 aa20.49■□□□□ 0.87
CHMP6-204ENST00000572778 ARL5AQ9Y689 179 aa20.49■□□□□ 0.87
CHMP6-204ENST00000572778 ARID1BQ8NFD5 2236 aaPredicted RBP20.49■□□□□ 0.87
CHMP6-204ENST00000572778 C2orf81A6NN90 581 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 PSMD3O43242 534 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 DNAJC6O75061 913 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 ACTN2P35609 894 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 ACTR1BP42025 376 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 ACTR1AP61163 376 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 TARDBPQ13148 414 aaKnown RBP eCLIP20.48■□□□□ 0.87
CHMP6-204ENST00000572778 PTPRCAPQ14761 206 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 SIX1Q15475 284 aaPredicted RBP20.48■□□□□ 0.87
CHMP6-204ENST00000572778 TAF1AQ15573 450 aaPredicted RBP20.48■□□□□ 0.87
CHMP6-204ENST00000572778 CCNG2Q16589 344 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 ATP13A5Q4VNC0 1218 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 DENND5AQ6IQ26 1287 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 FAM151BQ6UXP7 276 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 SFTPA2Q8IWL1 248 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 KLHDC8BQ8IXV7 354 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 GPR156Q8NFN8 814 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 TMEM121BQ9BXQ6 578 aaPredicted RBP20.48■□□□□ 0.87
CHMP6-204ENST00000572778 OR2AG1Q9H205 316 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 TRIM39Q9HCM9 518 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 IL26Q9NPH9 171 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 ATXN10Q9UBB4 475 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 CLCA2Q9UQC9 943 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 ST14Q9Y5Y6 855 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 SPEGQ15772 3267 aa20.48■□□□□ 0.87
CHMP6-204ENST00000572778 NOBOXO60393 691 aa20.47■□□□□ 0.87
CHMP6-204ENST00000572778 PPFIA2O75334 1257 aa20.47■□□□□ 0.87
CHMP6-204ENST00000572778 MT-CO3P00414 261 aa20.47■□□□□ 0.87
CHMP6-204ENST00000572778 LPOP22079 712 aaPredicted RBP20.47■□□□□ 0.87
CHMP6-204ENST00000572778 CHRNA6Q15825 494 aa20.47■□□□□ 0.87
CHMP6-204ENST00000572778 KCTD11Q693B1 232 aa20.47■□□□□ 0.87
CHMP6-204ENST00000572778 CHST15Q7LFX5 561 aaPredicted RBP20.47■□□□□ 0.87
CHMP6-204ENST00000572778 PRUNE1Q86TP1 453 aa20.47■□□□□ 0.87
CHMP6-204ENST00000572778 PDCD7Q8N8D1 485 aaKnown RBP20.47■□□□□ 0.87
CHMP6-204ENST00000572778 CCDC89Q8N998 374 aa20.47■□□□□ 0.87
CHMP6-204ENST00000572778 OR6C4Q8NGE1 309 aa20.47■□□□□ 0.87
CHMP6-204ENST00000572778 GDAP1Q8TB36 358 aa20.47■□□□□ 0.87
CHMP6-204ENST00000572778 BRSK1Q8TDC3 778 aa20.47■□□□□ 0.87
CHMP6-204ENST00000572778 ZDHHC1Q8WTX9 485 aa20.47■□□□□ 0.87
CHMP6-204ENST00000572778 CCDC74AQ96AQ1 378 aa20.47■□□□□ 0.87
CHMP6-204ENST00000572778 CCDC3Q9BQI4 270 aa20.47■□□□□ 0.87
CHMP6-204ENST00000572778 RMI1Q9H9A7 625 aa20.47■□□□□ 0.87
CHMP6-204ENST00000572778 ARNT2Q9HBZ2 717 aa20.47■□□□□ 0.87
CHMP6-204ENST00000572778 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.47■□□□□ 0.87
CHMP6-204ENST00000572778 PCYT1BQ9Y5K3 369 aaPredicted RBP20.47■□□□□ 0.87
CHMP6-204ENST00000572778 GLYATL1P3A0A0U1RQE8 302 aa20.46■□□□□ 0.87
CHMP6-204ENST00000572778 GRID2O43424 1007 aa20.46■□□□□ 0.87
CHMP6-204ENST00000572778 NUAK1O60285 661 aa20.46■□□□□ 0.87
CHMP6-204ENST00000572778 UGT1A9O60656 530 aa20.46■□□□□ 0.87
CHMP6-204ENST00000572778 MTX2O75431 263 aa20.46■□□□□ 0.87
CHMP6-204ENST00000572778 CRTAMO95727 393 aa20.46■□□□□ 0.87
CHMP6-204ENST00000572778 AP2A1O95782 977 aa20.46■□□□□ 0.87
CHMP6-204ENST00000572778 ETS1P14921 441 aa20.46■□□□□ 0.87
CHMP6-204ENST00000572778 ZNF8P17098 575 aaPredicted RBP20.46■□□□□ 0.87
CHMP6-204ENST00000572778 UGT1A6P19224 532 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms