RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 CACTIN-AS1Q8N1I8 211 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 TTC30BQ8N4P2 665 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 FAM46DQ8NEK8 389 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 OR6C4Q8NGE1 309 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 CCL4L1Q8NHW4 92 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 DTX3LQ8TDB6 740 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 PTCD2Q8WV60 388 aaKnown RBP13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 MAIP1Q8WWC4 291 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 ATG4AQ8WYN0 398 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 GATA6Q92908 595 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 NAT6Q93015 286 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 RTP4Q96DX8 246 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 TMEM121BQ9BXQ6 578 aaPredicted RBP13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 ABCG4Q9H172 646 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 SUDS3Q9H7L9 328 aaPredicted RBP13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 RMI1Q9H9A7 625 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 BPIFA1Q9NP55 256 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 IL17CQ9P0M4 197 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 SIRPGQ9P1W8 387 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 PADI4Q9UM07 663 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 GPSM3Q9Y4H4 160 aa13.71□□□□□ -0.21
HERPUD1-218ENST00000569569 KIF26BQ2KJY2 2108 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 FAM149AA5PLN7 773 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 PSMD3O43242 534 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 PPFIA2O75334 1257 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 SLC25A14O95258 325 aaPredicted RBP13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 ATP1A1P05023 1023 aaKnown RBP13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 ADCY8P40145 1251 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 CTBSQ01459 385 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 CCNG2Q16589 344 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 ZNF569Q5MCW4 686 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 HES3Q5TGS1 186 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 KCTD11Q693B1 232 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 UNQ6494/PRO21346Q6UXR6 183 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 MARK2Q7KZI7 788 aaKnown RBP13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 NRROSQ86YC3 692 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 GALNT13Q8IUC8 556 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 REXO1L1PQ8IX06 675 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 GPR156Q8NFN8 814 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 C1orf54Q8WWF1 131 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 PDLIM2Q96JY6 352 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 OR2M4Q96R27 311 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 TBL1YQ9BQ87 522 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 APOL2Q9BQE5 337 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 DPEP2Q9H4A9 486 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 ARNT2Q9HBZ2 717 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 TRIM39Q9HCM9 518 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 FEZ2Q9UHY8 353 aaPredicted RBP13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 ZNF148Q9UQR1 794 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 ZKSCAN5Q9Y2L8 839 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 PKP3Q9Y446 797 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 JRKLQ9Y4A0 524 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 OAS3Q9Y6K5 1087 aaKnown RBP13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 PIKFYVEQ9Y2I7 2098 aa13.7□□□□□ -0.22
HERPUD1-218ENST00000569569 C2orf81A6NN90 581 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 C1QTNF9BB2RNN3 333 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 STX7O15400 261 aaKnown RBP13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 NUAK1O60285 661 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 OPA1O60313 960 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 DNAJC6O75061 913 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 METTL18O95568 372 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 FGGP02679 453 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 C1QTNF9P0C862 333 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 LPOP22079 712 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 AK4P27144 223 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 ACTN2P35609 894 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 SPAM1P38567 509 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 MSLNQ13421 630 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 OLIG2Q13516 323 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 SNX1Q13596 522 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 LRP8Q14114 963 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 SIX1Q15475 284 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 TAF1AQ15573 450 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 PERM1Q5SV97 790 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 KYQ8NBH2 561 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 MAPK15Q8TD08 544 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 BRSK1Q8TDC3 778 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 GLYATL1Q969I3 302 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 VPS35Q96QK1 796 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 KCNF1Q9H3M0 494 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 LRRC40Q9H9A6 602 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 SPATS2LQ9NUQ6 558 aaKnown RBP13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 TAAR2Q9P1P5 351 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 ZNHIT2Q9UHR6 403 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 CLCA2Q9UQC9 943 aa13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 DRG1Q9Y295 367 aaKnown RBP13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 COL27A1Q8IZC6 1860 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-218ENST00000569569 B4DGG1 531 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 GPR89AB7ZAQ6 455 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 CEP104O60308 925 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 NOBOXO60393 691 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 USP12O75317 370 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 CRTAMO95727 393 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 MT-CO3P00414 261 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 IFNB1P01574 187 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 PROS1P07225 676 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 GPR89BP0CG08 455 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 CXCR5P32302 372 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 FDFT1P37268 417 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 ACTR1BP42025 376 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms