RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 TIMM44O43615 452 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 ALOX5P09917 674 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 SLC6A2P23975 617 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 CTU2Q2VPK5 515 aaKnown RBP16.23■□□□□ 0.19
LINC00554-201ENST00000564841 TMC5Q6UXY8 1006 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 COLGALT2Q8IYK4 626 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 RDH11Q8TC12 318 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 WDR12Q9GZL7 423 aaKnown RBP16.23■□□□□ 0.19
LINC00554-201ENST00000564841 DNAI2Q9GZS0 605 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 AP5M1Q9H0R1 490 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 ILVBLA1L0T0 632 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 MYADML2A6NDP7 307 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 MDM4O15151 490 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 CDH1P12830 882 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 JUNBP17275 347 aaPredicted RBP16.22■□□□□ 0.19
LINC00554-201ENST00000564841 PIGAP37287 484 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 MAPRE2Q15555 327 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 DPYSL2Q16555 572 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 C4orf22Q6V702 233 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 PAGE2Q7Z2X7 111 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 STK32CQ86UX6 486 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 NAT9Q9BTE0 207 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 PAK1IP1Q9NWT1 392 aaPredicted RBP16.22■□□□□ 0.19
LINC00554-201ENST00000564841 ENPP5Q9UJA9 477 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 A8MV72 311 aaPredicted RBP16.22■□□□□ 0.19
LINC00554-201ENST00000564841 M0R3G1 203 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 CLDN5O00501 218 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 TBX1O43435 398 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 XPNPEP2O43895 674 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 FKBP1BP68106 108 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 FAM214AQ32MH5 1076 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 GNASQ5JWF2 1037 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 CXCL17Q6UXB2 119 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 RASAL3Q86YV0 1011 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 ARMC8Q8IUR7 673 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 ABI1Q8IZP0 508 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 CLEC4FQ8N1N0 589 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 DEPDC4Q8N2C3 294 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 RPL3LQ92901 407 aaKnown RBP16.22■□□□□ 0.19
LINC00554-201ENST00000564841 GPR22Q99680 433 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 RMND5AQ9H871 391 aa16.22■□□□□ 0.19
LINC00554-201ENST00000564841 AQP12BA6NM10 295 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 HOXC11O43248 304 aaPredicted RBP16.21■□□□□ 0.19
LINC00554-201ENST00000564841 NUAK1O60285 661 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 HOXA11P31270 313 aaPredicted RBP16.21■□□□□ 0.19
LINC00554-201ENST00000564841 MAP2K4P45985 399 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 TAS2R39P59534 338 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 ATP6V0D1P61421 351 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 PHC1P78364 1004 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 CRHR2Q13324 411 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 SLC12A1Q13621 1099 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 FAM83EQ2M2I3 478 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 PLA2G4EQ3MJ16 856 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 ARHGAP17Q68EM7 881 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 TXNDC11Q6PKC3 985 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 RBM23Q86U06 439 aaKnown RBP16.21■□□□□ 0.19
LINC00554-201ENST00000564841 AQP12AQ8IXF9 295 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 OR7A2PQ8NGA2 310 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 ZUFSPQ96AP4 578 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 TBCBQ99426 244 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 CHID1Q9BWS9 393 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 SMOC2Q9H3U7 446 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 GJD2Q9UKL4 321 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 CAB39Q9Y376 341 aaPredicted RBP16.21■□□□□ 0.19
LINC00554-201ENST00000564841 PCDHGA11Q9Y5H2 935 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 ZBTB24O43167 697 aaPredicted RBP16.21■□□□□ 0.19
LINC00554-201ENST00000564841 LDLRP01130 860 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 NDUFV1P49821 464 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 TPD52P55327 224 aaPredicted RBP16.21■□□□□ 0.19
LINC00554-201ENST00000564841 GRB7Q14451 532 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 NDUFA5Q16718 116 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 POC5Q8NA72 575 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 FAM83FQ8NEG4 500 aaPredicted RBP16.21■□□□□ 0.19
LINC00554-201ENST00000564841 C17orf80Q9BSJ5 609 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 EMILIN2Q9BXX0 1053 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 MOSPD1Q9UJG1 213 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 INVSQ9Y283 1065 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 SNX10Q9Y5X0 201 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 SCN4AP35499 1836 aa16.21■□□□□ 0.19
LINC00554-201ENST00000564841 SCN1AP35498 2009 aa16.21■□□□□ 0.18
LINC00554-201ENST00000564841 TAF4O00268 1085 aa16.21■□□□□ 0.18
LINC00554-201ENST00000564841 RECQL4O94761 1208 aa16.21■□□□□ 0.18
LINC00554-201ENST00000564841 GPX3P22352 226 aa16.21■□□□□ 0.18
LINC00554-201ENST00000564841 GTF2E2P29084 291 aaKnown RBP16.21■□□□□ 0.18
LINC00554-201ENST00000564841 NR2C2P49116 596 aa16.21■□□□□ 0.18
LINC00554-201ENST00000564841 GSK3BP49841 420 aa16.21■□□□□ 0.18
LINC00554-201ENST00000564841 SLC6A3Q01959 620 aa16.21■□□□□ 0.18
LINC00554-201ENST00000564841 LAPTM5Q13571 262 aa16.21■□□□□ 0.18
LINC00554-201ENST00000564841 KDELC2Q7Z4H8 507 aa16.21■□□□□ 0.18
LINC00554-201ENST00000564841 ADCK1Q86TW2 530 aa16.21■□□□□ 0.18
LINC00554-201ENST00000564841 LINC01465Q8N7H1 131 aa16.21■□□□□ 0.18
LINC00554-201ENST00000564841 TP53INP1Q96A56 240 aa16.21■□□□□ 0.18
LINC00554-201ENST00000564841 CNDP2Q96KP4 475 aaKnown RBP16.21■□□□□ 0.18
LINC00554-201ENST00000564841 TOR3AQ9H497 397 aa16.21■□□□□ 0.18
LINC00554-201ENST00000564841 MEAF6Q9HAF1 191 aa16.21■□□□□ 0.18
LINC00554-201ENST00000564841 NTN4Q9HB63 628 aa16.21■□□□□ 0.18
LINC00554-201ENST00000564841 ACTR3BQ9P1U1 418 aa16.21■□□□□ 0.18
LINC00554-201ENST00000564841 SLC45A1Q9Y2W3 748 aa16.21■□□□□ 0.18
LINC00554-201ENST00000564841 TTC24A2A3L6 582 aaPredicted RBP16.2■□□□□ 0.18
LINC00554-201ENST00000564841 MFN2O95140 757 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms