RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 ARHGEF17Q96PE2 2063 aaPredicted RBP18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 SRRM3A6NNA2 597 aaPredicted RBP18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 NRDCO43847 1150 aa18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 CSO75390 466 aaKnown RBP18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 GLB1P16278 677 aa18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 HLA-DPA1P20036 260 aa18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 AK4P27144 223 aaPredicted RBP18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 DCDC1P59894 354 aa18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 CTBSQ01459 385 aa18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 SLC1A5Q15758 541 aa18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 C14orf28Q4W4Y0 310 aa18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 PYCR3Q53H96 274 aa18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 SLC30A9Q6PML9 568 aa18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 NRROSQ86YC3 692 aa18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 LRRC8AQ8IWT6 810 aa18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 ZDHHC1Q8WTX9 485 aa18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 UBE2Q2Q8WVN8 375 aa18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 SPATS2LQ9NUQ6 558 aaKnown RBP18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 HACD3Q9P035 362 aa18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 TAAR2Q9P1P5 351 aa18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 VPS18Q9P253 973 aa18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 CNOT6Q9ULM6 557 aaKnown RBP18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 AAR2Q9Y312 384 aaKnown RBP18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 SPO11Q9Y5K1 396 aa18.21■□□□□ 0.51
SYNGR3-204ENST00000564642 TAF4O00268 1085 aa18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 AURKAO14965 403 aa18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 NOBOXO60393 691 aa18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 TCEA3O75764 348 aa18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 SLC25A14O95258 325 aaPredicted RBP18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 FGF1P05230 155 aa18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 CCDC175P0C221 793 aa18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 HMGCLP35914 325 aa18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 ACTR1BP42025 376 aa18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 CHRNA4P43681 627 aa18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 ACTR1AP61163 376 aa18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 SPIDRQ14159 915 aa18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 RTP5Q14D33 572 aa18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 ZNF569Q5MCW4 686 aa18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 RBM44Q6ZP01 1051 aaKnown RBP18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 TRAM1L1Q8N609 369 aa18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 RMI1Q9H9A7 625 aa18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 BPIFA1Q9NP55 256 aa18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 LRIT1Q9P2V4 623 aa18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 PCDHB1Q9Y5F3 818 aa18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 OAS3Q9Y6K5 1087 aaKnown RBP18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 ZFC3H1O60293 1989 aaKnown RBP18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 AKAP13Q12802 2813 aa18.2■□□□□ 0.5
SYNGR3-204ENST00000564642 USP12O75317 370 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 AGTP01019 485 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 BPIP17213 487 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 BIRC2Q13490 618 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 LRP8Q14114 963 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 HLTFQ14527 1009 aaKnown RBP eCLIP18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 ISXQ2M1V0 245 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 CERCAMQ5T4B2 595 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 SEL1L2Q5TEA6 688 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 PDPK2PQ6A1A2 396 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 GLT6D1Q7Z4J2 308 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 SFTPA2Q8IWL1 248 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 CCDC110Q8TBZ0 833 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 BLOC1S5Q8TDH9 187 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 LRRC45Q96CN5 670 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 GRAMD1AQ96CP6 724 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 SPATA13Q96N96 652 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 PPP1R2P1Q96PQ5 205 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 FICDQ9BVA6 458 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 LZTFL1Q9NQ48 299 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 NFKBIL1Q9UBC1 381 aaPredicted RBP18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 RABGEF1Q9UJ41 708 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 PLEKHM1Q9Y4G2 1056 aa18.19■□□□□ 0.5
SYNGR3-204ENST00000564642 ASPMQ8IZT6 3477 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 NUDT21O43809 227 aaKnown RBP18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 DNAJC6O75061 913 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 PNLIPP16233 465 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 PSMB4P28070 264 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 CCL7P80098 99 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 ZDHHC20Q5W0Z9 365 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 CHST15Q7LFX5 561 aaPredicted RBP18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 CCNJLQ8IV13 435 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 Q8N9G6 341 aaPredicted RBP18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 GLYATL1Q969I3 302 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 PLEKHG4BQ96PX9 1271 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 ALS2CR12Q96Q35 445 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 GFM1Q96RP9 751 aaKnown RBP18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 CARD9Q9H257 536 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 LRRN3Q9H3W5 708 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 TRIM39Q9HCM9 518 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 ARFGAP3Q9NP61 516 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 ATXN10Q9UBB4 475 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 APPL1Q9UKG1 709 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 PKP3Q9Y446 797 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 PRKAB1Q9Y478 270 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 RNF215Q9Y6U7 377 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 SCN8AQ9UQD0 1980 aa18.18■□□□□ 0.5
SYNGR3-204ENST00000564642 IGF2RP11717 2491 aa18.17■□□□□ 0.5
SYNGR3-204ENST00000564642 RHPN2P1A8MT19 583 aa18.17■□□□□ 0.5
SYNGR3-204ENST00000564642 NTN3O00634 580 aaPredicted RBP18.17■□□□□ 0.5
SYNGR3-204ENST00000564642 ZW10O43264 779 aa18.17■□□□□ 0.5
SYNGR3-204ENST00000564642 GRID2O43424 1007 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms