RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 PPP1R16AQ96I34 528 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 MRGPRX3Q96LB0 322 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 DMRTB1Q96MA1 342 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 NSMCE3Q96MG7 304 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 CDH19Q9H159 772 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 MLXIPLQ9NP71 852 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 HPS4Q9NQG7 708 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 FBXO6Q9NRD1 293 aaPredicted RBP9.67□□□□□ -0.86
UBFD1-202ENST00000563366 IL17CQ9P0M4 197 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 SLC17A7Q9P2U7 560 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 EPS15L1Q9UBC2 864 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 DKK3Q9UBP4 350 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 IL36AQ9UHA7 158 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 SLCO3A1Q9UIG8 710 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 MTCH2Q9Y6C9 303 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 MYO9BQ13459 2157 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 TICRRQ7Z2Z1 1910 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 CCDC189A1A4V9 331 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 PLIN3O60664 434 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 HAUS5O94927 633 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 IL1BP01584 269 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 SLC4A1P02730 911 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 APODP05090 189 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 RPLP1P05386 114 aaKnown RBP9.66□□□□□ -0.86
UBFD1-202ENST00000563366 UGT2B4P06133 528 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 PYGLP06737 847 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 ALPIP09923 528 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 TAC1P20366 129 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 DRD4P21917 467 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 CD9P21926 228 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 XPAP23025 273 aaPredicted RBP9.66□□□□□ -0.86
UBFD1-202ENST00000563366 ALDH3A1P30838 453 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 MC4RP32245 332 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 FOXN2P32314 431 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 GJA4P35212 333 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 HNF1BP35680 557 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 SPAM1P38567 509 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 GRIA2P42262 883 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 PTGER3P43115 390 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 CSRP3P50461 194 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 PRKAA2P54646 552 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 ITGA9Q13797 1035 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 ARHGEF7Q14155 803 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 ELAVL3Q14576 367 aaKnown RBP9.66□□□□□ -0.86
UBFD1-202ENST00000563366 SMAD1Q15797 465 aaKnown RBP9.66□□□□□ -0.86
UBFD1-202ENST00000563366 ZSCAN26Q16670 478 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 HNRNPA1L2Q32P51 320 aaKnown RBP9.66□□□□□ -0.86
UBFD1-202ENST00000563366 GLIPR1L2Q4G1C9 344 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 FNDC3BQ53EP0 1204 aaKnown RBP9.66□□□□□ -0.86
UBFD1-202ENST00000563366 ZNF805Q5CZA5 627 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 N4BP2L1Q5TBK1 243 aaPredicted RBP9.66□□□□□ -0.86
UBFD1-202ENST00000563366 AGAP9Q5VTM2 703 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 FIGNL1Q6PIW4 674 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 EP400NLQ6ZTU2 488 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 CMC1Q7Z7K0 106 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 CLEC14AQ86T13 490 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 NUDCD3Q8IVD9 361 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 CACNA2D3Q8IZS8 1091 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 GJD3Q8N144 294 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 PPP1R14CQ8TAE6 165 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 CSGALNACT1Q8TDX6 532 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 OR8D1Q8WZ84 308 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 ZNF75CPQ92670 426 aaPredicted RBP9.66□□□□□ -0.86
UBFD1-202ENST00000563366 CCDC126Q96EE4 140 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 ZFYVE19Q96K21 471 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 MSLNLQ96KJ4 702 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 PLEKHG4BQ96PX9 1271 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 MYADMQ96S97 322 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 FAM129BQ96TA1 746 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 PITPNM3Q9BZ71 974 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 FAM107BQ9H098 131 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 MANSC1Q9H8J5 431 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 SYTL2Q9HCH5 934 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 PKD2L2Q9NZM6 624 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 SIRPGQ9P1W8 387 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 STARD13Q9Y3M8 1113 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 KCTD3Q9Y597 815 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 PCDHB1Q9Y5F3 818 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 BPTFQ12830 3046 aa9.66□□□□□ -0.86
UBFD1-202ENST00000563366 PDE4DIPQ5VU43 2346 aa9.65□□□□□ -0.86
UBFD1-202ENST00000563366 RANBP2P49792 3224 aaKnown RBP9.65□□□□□ -0.86
UBFD1-202ENST00000563366 GLYATL1P3A0A0U1RQE8 302 aa9.65□□□□□ -0.86
UBFD1-202ENST00000563366 RGSL1A5PLK6 1076 aa9.65□□□□□ -0.86
UBFD1-202ENST00000563366 TBC1D3BA6NDS4 549 aa9.65□□□□□ -0.86
UBFD1-202ENST00000563366 UPK3BL1B0FP48 263 aa9.65□□□□□ -0.86
UBFD1-202ENST00000563366 UPK3BL2E5RIL1 263 aa9.65□□□□□ -0.86
UBFD1-202ENST00000563366 F8W8V4 182 aa9.65□□□□□ -0.86
UBFD1-202ENST00000563366 H3BMM5 538 aa9.65□□□□□ -0.86
UBFD1-202ENST00000563366 AURKAO14965 403 aa9.65□□□□□ -0.86
UBFD1-202ENST00000563366 BUD23O43709 281 aaKnown RBP9.65□□□□□ -0.86
UBFD1-202ENST00000563366 EDF1O60869 148 aaKnown RBP9.65□□□□□ -0.86
UBFD1-202ENST00000563366 VPS26AO75436 327 aa9.65□□□□□ -0.86
UBFD1-202ENST00000563366 SNUPNO95149 360 aaKnown RBP9.65□□□□□ -0.86
UBFD1-202ENST00000563366 KLHL2O95198 593 aa9.65□□□□□ -0.86
UBFD1-202ENST00000563366 ESR1P03372 595 aa9.65□□□□□ -0.86
UBFD1-202ENST00000563366 PROCP04070 461 aa9.65□□□□□ -0.86
UBFD1-202ENST00000563366 BPGMP07738 259 aa9.65□□□□□ -0.86
UBFD1-202ENST00000563366 SLC35E2BP0CK96 405 aa9.65□□□□□ -0.86
UBFD1-202ENST00000563366 TROVE2P10155 538 aaKnown RBP eCLIP9.65□□□□□ -0.86
UBFD1-202ENST00000563366 ZNF7P17097 686 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms