RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 CNGA4Q8IV77 575 aa16.66■□□□□ 0.26
TNRC6A-209ENST00000562829 RAVER1Q8IY67 606 aaKnown RBP16.66■□□□□ 0.26
TNRC6A-209ENST00000562829 CNTD1Q8N815 330 aa16.66■□□□□ 0.26
TNRC6A-209ENST00000562829 RCBTB1Q8NDN9 531 aa16.66■□□□□ 0.26
TNRC6A-209ENST00000562829 USP7Q93009 1102 aa16.66■□□□□ 0.26
TNRC6A-209ENST00000562829 CCDC74BQ96LY2 380 aa16.66■□□□□ 0.26
TNRC6A-209ENST00000562829 AGAP3Q96P47 875 aa16.66■□□□□ 0.26
TNRC6A-209ENST00000562829 KCNK4Q9NYG8 393 aa16.66■□□□□ 0.26
TNRC6A-209ENST00000562829 SSUH2Q9Y2M2 353 aa16.66■□□□□ 0.26
TNRC6A-209ENST00000562829 PRKAB1Q9Y478 270 aa16.66■□□□□ 0.26
TNRC6A-209ENST00000562829 HYOU1Q9Y4L1 999 aa16.66■□□□□ 0.26
TNRC6A-209ENST00000562829 OAS3Q9Y6K5 1087 aaKnown RBP16.66■□□□□ 0.26
TNRC6A-209ENST00000562829 C3orf70A6NLC5 250 aaPredicted RBP16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 FADS2P1A8MWK0 482 aa16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 MTA2O94776 668 aa16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 CD1CP29017 333 aa16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 CLPPQ16740 277 aaPredicted RBP16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 HENMT1Q5T8I9 393 aaKnown RBP16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 TMEM164Q5U3C3 297 aa16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 ALS2CLQ60I27 953 aa16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 B4GALNT4Q76KP1 1039 aa16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 LYSMD3Q7Z3D4 306 aa16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 NT5DC3Q86UY8 548 aa16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 VSIG1Q86XK7 387 aa16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 ZNF761Q86XN6 746 aaPredicted RBP16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 RHOT1Q8IXI2 618 aa16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 SLC37A2Q8TED4 501 aa16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 SNRNP27Q8WVK2 155 aaKnown RBP16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 AHCYL2Q96HN2 611 aaKnown RBP16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 WDR24Q96S15 920 aa16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 SLC38A3Q99624 504 aa16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 ZFYVE1Q9HBF4 777 aa16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 DDX56Q9NY93 547 aaKnown RBP16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 FOXJ2Q9P0K8 574 aa16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 VPS18Q9P253 973 aa16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 ACSL6Q9UKU0 697 aa16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 SHOC2Q9UQ13 582 aa16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 SMG1Q96Q15 3661 aaKnown RBP16.65■□□□□ 0.26
TNRC6A-209ENST00000562829 IGHV1OR21-1A0A087WYE8 117 aa16.64■□□□□ 0.25
TNRC6A-209ENST00000562829 IGHV5-10-1A0A0J9YXX1 117 aa16.64■□□□□ 0.25
TNRC6A-209ENST00000562829 AKR1B15C9JRZ8 316 aaPredicted RBP16.64■□□□□ 0.25
TNRC6A-209ENST00000562829 DNAJC6O75061 913 aa16.64■□□□□ 0.25
TNRC6A-209ENST00000562829 PIRTP0C851 137 aa16.64■□□□□ 0.25
TNRC6A-209ENST00000562829 ACP5P13686 325 aa16.64■□□□□ 0.25
TNRC6A-209ENST00000562829 SLC1A1P43005 524 aa16.64■□□□□ 0.25
TNRC6A-209ENST00000562829 LRRC38Q5VT99 294 aa16.64■□□□□ 0.25
TNRC6A-209ENST00000562829 ZNF574Q6ZN55 896 aaPredicted RBP16.64■□□□□ 0.25
TNRC6A-209ENST00000562829 ZFAND4Q86XD8 727 aa16.64■□□□□ 0.25
TNRC6A-209ENST00000562829 ZNF843Q8N446 348 aa16.64■□□□□ 0.25
TNRC6A-209ENST00000562829 OLFM3Q96PB7 478 aa16.64■□□□□ 0.25
TNRC6A-209ENST00000562829 SPATA16Q9BXB7 569 aa16.64■□□□□ 0.25
TNRC6A-209ENST00000562829 STN1Q9H668 368 aaKnown RBP16.64■□□□□ 0.25
TNRC6A-209ENST00000562829 CNOT6Q9ULM6 557 aaKnown RBP16.64■□□□□ 0.25
TNRC6A-209ENST00000562829 KCNK6Q9Y257 313 aa16.64■□□□□ 0.25
TNRC6A-209ENST00000562829 PCDHB11Q9Y5F2 797 aa16.64■□□□□ 0.25
TNRC6A-209ENST00000562829 PCYT1BQ9Y5K3 369 aaPredicted RBP16.64■□□□□ 0.25
TNRC6A-209ENST00000562829 AHCTF1Q8WYP5 2266 aa16.64■□□□□ 0.25
TNRC6A-209ENST00000562829 RGSL1A5PLK6 1076 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 HGSO14964 777 aaPredicted RBP16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 SNX2O60749 519 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 CCL4P13236 92 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 COMTP21964 271 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 MPSTP25325 297 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 CSF2RBP32927 897 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 NOP2P46087 812 aaKnown RBP16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 LIMK2P53671 638 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 HHEXQ03014 270 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 SRSF6Q13247 344 aaKnown RBP16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 LY6DQ14210 128 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 ZNF569Q5MCW4 686 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 MANEAQ5SRI9 462 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 CCDC70Q6NSX1 233 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 MFSD7Q6UXD7 560 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 TTC9Q92623 222 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 IMP4Q96G21 291 aaKnown RBP16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 WBP1Q96G27 269 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 GPR63Q9BZJ6 419 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 BRD8Q9H0E9 1235 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 SLC25A51Q9H1U9 297 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 RMI1Q9H9A7 625 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 ARFGAP3Q9NP61 516 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 INTUQ9ULD6 942 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 ZNF711Q9Y462 761 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 MGAQ8IWI9 3026 aa16.63■□□□□ 0.25
TNRC6A-209ENST00000562829 A0A0A6YYK5 440 aaPredicted RBP16.62■□□□□ 0.25
TNRC6A-209ENST00000562829 C9orf172C9J069 976 aa16.62■□□□□ 0.25
TNRC6A-209ENST00000562829 DUX1O43812 170 aa16.62■□□□□ 0.25
TNRC6A-209ENST00000562829 SLC25A14O95258 325 aaPredicted RBP16.62■□□□□ 0.25
TNRC6A-209ENST00000562829 EML2O95834 649 aa16.62■□□□□ 0.25
TNRC6A-209ENST00000562829 CSTF2P33240 577 aaKnown RBP eCLIP16.62■□□□□ 0.25
TNRC6A-209ENST00000562829 FASLGP48023 281 aa16.62■□□□□ 0.25
TNRC6A-209ENST00000562829 GPLD1P80108 840 aa16.62■□□□□ 0.25
TNRC6A-209ENST00000562829 CDK18Q07002 472 aa16.62■□□□□ 0.25
TNRC6A-209ENST00000562829 NFATC2Q13469 925 aa16.62■□□□□ 0.25
TNRC6A-209ENST00000562829 TRA2AQ13595 282 aaKnown RBP eCLIP16.62■□□□□ 0.255e-15■■■□□ 16.3
TNRC6A-209ENST00000562829 TFDP2Q14188 446 aa16.62■□□□□ 0.25
TNRC6A-209ENST00000562829 LLGL1Q15334 1064 aa16.62■□□□□ 0.25
TNRC6A-209ENST00000562829 KAZNQ674X7 775 aa16.62■□□□□ 0.25
TNRC6A-209ENST00000562829 BZW1Q7L1Q6 419 aaKnown RBP16.62■□□□□ 0.25
TNRC6A-209ENST00000562829 VASH2Q86V25 355 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms