RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 TAB3Q8N5C8 712 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-206ENST00000562610 TRAM1L1Q8N609 369 aa16.01■□□□□ 0.15
COMMD4-206ENST00000562610 TBL1YQ9BQ87 522 aa16.01■□□□□ 0.15
COMMD4-206ENST00000562610 TMEM121BQ9BXQ6 578 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-206ENST00000562610 ARFGAP3Q9NP61 516 aa16.01■□□□□ 0.15
COMMD4-206ENST00000562610 TRNAU1APQ9NX07 287 aaKnown RBP16.01■□□□□ 0.15
COMMD4-206ENST00000562610 VPS18Q9P253 973 aa16.01■□□□□ 0.15
COMMD4-206ENST00000562610 PADI4Q9UM07 663 aa16.01■□□□□ 0.15
COMMD4-206ENST00000562610 CLCA2Q9UQC9 943 aa16.01■□□□□ 0.15
COMMD4-206ENST00000562610 BUD23O43709 281 aaKnown RBP16■□□□□ 0.15
COMMD4-206ENST00000562610 LIASO43766 372 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 OPA1O60313 960 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 USP12O75317 370 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 AK4P27144 223 aaPredicted RBP16■□□□□ 0.15
COMMD4-206ENST00000562610 HMGCLP35914 325 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 ADCY8P40145 1251 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 CTBSQ01459 385 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 SNX1Q13596 522 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 SPARCL1Q14515 664 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 P3H1Q32P28 736 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 PDPK2PQ6A1A2 396 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 TTC30BQ8N4P2 665 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 GPBAR1Q8TDU6 330 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 C1orf54Q8WWF1 131 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 ZCCHC14Q8WYQ9 949 aaKnown RBP16■□□□□ 0.15
COMMD4-206ENST00000562610 CCDC74AQ96AQ1 378 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 PLEKHG4BQ96PX9 1271 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 TLR10Q9BXR5 811 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 FRMD8P1Q9BZ68 369 aaPredicted RBP16■□□□□ 0.15
COMMD4-206ENST00000562610 ZNHIT2Q9UHR6 403 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 CNOT6Q9ULM6 557 aaKnown RBP16■□□□□ 0.15
COMMD4-206ENST00000562610 PKP3Q9Y446 797 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 PRKAB1Q9Y478 270 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 FRYQ5TBA9 3013 aa16■□□□□ 0.15
COMMD4-206ENST00000562610 SLC25A14O95258 325 aaPredicted RBP15.99■□□□□ 0.15
COMMD4-206ENST00000562610 IFNB1P01574 187 aa15.99■□□□□ 0.15
COMMD4-206ENST00000562610 PROS1P07225 676 aa15.99■□□□□ 0.15
COMMD4-206ENST00000562610 ADRA1AP35348 466 aa15.99■□□□□ 0.15
COMMD4-206ENST00000562610 SPAM1P38567 509 aa15.99■□□□□ 0.15
COMMD4-206ENST00000562610 ACTR1BP42025 376 aa15.99■□□□□ 0.15
COMMD4-206ENST00000562610 ACTR1AP61163 376 aa15.99■□□□□ 0.15
COMMD4-206ENST00000562610 TARDBPQ13148 414 aaKnown RBP eCLIP15.99■□□□□ 0.15
COMMD4-206ENST00000562610 ST3GAL2Q16842 350 aa15.99■□□□□ 0.15
COMMD4-206ENST00000562610 PYCR3Q53H96 274 aa15.99■□□□□ 0.15
COMMD4-206ENST00000562610 FAM151BQ6UXP7 276 aa15.99■□□□□ 0.15
COMMD4-206ENST00000562610 NRROSQ86YC3 692 aa15.99■□□□□ 0.15
COMMD4-206ENST00000562610 SFTPA2Q8IWL1 248 aa15.99■□□□□ 0.15
COMMD4-206ENST00000562610 ZDHHC1Q8WTX9 485 aa15.99■□□□□ 0.15
COMMD4-206ENST00000562610 GLYATL1Q969I3 302 aa15.99■□□□□ 0.15
COMMD4-206ENST00000562610 SCARF2Q96GP6 870 aaPredicted RBP15.99■□□□□ 0.15
COMMD4-206ENST00000562610 CCDC3Q9BQI4 270 aa15.99■□□□□ 0.15
COMMD4-206ENST00000562610 TAAR2Q9P1P5 351 aa15.99■□□□□ 0.15
COMMD4-206ENST00000562610 ZNF148Q9UQR1 794 aa15.99■□□□□ 0.15
COMMD4-206ENST00000562610 PLEKHM1Q9Y4G2 1056 aa15.99■□□□□ 0.15
COMMD4-206ENST00000562610 WDFY3Q8IZQ1 3526 aa15.99■□□□□ 0.15
COMMD4-206ENST00000562610 KIF26BQ2KJY2 2108 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 ASPMQ8IZT6 3477 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 UNC13CQ8NB66 2214 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 STX7O15400 261 aaKnown RBP15.98■□□□□ 0.15
COMMD4-206ENST00000562610 NOBOXO60393 691 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 METTL18O95568 372 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 MT-CO3P00414 261 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 FGGP02679 453 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 CXCR5P32302 372 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 ACTN2P35609 894 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 OASLQ15646 514 aaKnown RBP15.98■□□□□ 0.15
COMMD4-206ENST00000562610 PARP6Q2NL67 630 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 C14orf28Q4W4Y0 310 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 ZNF648Q5T619 568 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-206ENST00000562610 RANBP10Q6VN20 620 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 CHST15Q7LFX5 561 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-206ENST00000562610 GPR156Q8NFN8 814 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 GDAP1Q8TB36 358 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 DEPDC7Q96QD5 511 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 OR2AG1Q9H205 316 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 KCNF1Q9H3M0 494 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 LRRC40Q9H9A6 602 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 SPATS2LQ9NUQ6 558 aaKnown RBP15.98■□□□□ 0.15
COMMD4-206ENST00000562610 IL17CQ9P0M4 197 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 PCYT1BQ9Y5K3 369 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-206ENST00000562610 ST14Q9Y5Y6 855 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 ARL5AQ9Y689 179 aa15.98■□□□□ 0.15
COMMD4-206ENST00000562610 KNTC1P50748 2209 aa15.97■□□□□ 0.15
COMMD4-206ENST00000562610 GLYATL1P3A0A0U1RQE8 302 aa15.97■□□□□ 0.15
COMMD4-206ENST00000562610 TMEM8BA6NDV4 472 aa15.97■□□□□ 0.15
COMMD4-206ENST00000562610 C2orf81A6NN90 581 aa15.97■□□□□ 0.15
COMMD4-206ENST00000562610 ZSCAN12O43309 604 aa15.97■□□□□ 0.15
COMMD4-206ENST00000562610 CEP104O60308 925 aa15.97■□□□□ 0.15
COMMD4-206ENST00000562610 DNAJC6O75061 913 aa15.97■□□□□ 0.15
COMMD4-206ENST00000562610 MTX2O75431 263 aa15.97■□□□□ 0.15
COMMD4-206ENST00000562610 ACP5P13686 325 aa15.97■□□□□ 0.15
COMMD4-206ENST00000562610 LPOP22079 712 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-206ENST00000562610 MAZP56270 477 aaKnown RBP15.97■□□□□ 0.15
COMMD4-206ENST00000562610 BIRC2Q13490 618 aa15.97■□□□□ 0.15
COMMD4-206ENST00000562610 PEX6Q13608 980 aa15.97■□□□□ 0.15
COMMD4-206ENST00000562610 LRP8Q14114 963 aa15.97■□□□□ 0.15
COMMD4-206ENST00000562610 PTPRCAPQ14761 206 aa15.97■□□□□ 0.15
COMMD4-206ENST00000562610 TAF1AQ15573 450 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-206ENST00000562610 PLA2G4EQ3MJ16 856 aa15.97■□□□□ 0.15
COMMD4-206ENST00000562610 ATP13A5Q4VNC0 1218 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms