RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 GLYATL1Q969I3 302 aa16.59■□□□□ 0.25
CLK3-207ENST00000562389 CLPBQ9H078 707 aa16.59■□□□□ 0.25
CLK3-207ENST00000562389 CASS4Q9NQ75 786 aa16.59■□□□□ 0.25
CLK3-207ENST00000562389 MOSPD1Q9UJG1 213 aa16.59■□□□□ 0.25
CLK3-207ENST00000562389 SUFUQ9UMX1 484 aa16.59■□□□□ 0.25
CLK3-207ENST00000562389 OAS3Q9Y6K5 1087 aaKnown RBP16.59■□□□□ 0.25
CLK3-207ENST00000562389 SPTBN4Q9H254 2564 aa16.59■□□□□ 0.25
CLK3-207ENST00000562389 GLYATL1P3A0A0U1RQE8 302 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 GAPDHSO14556 408 aaPredicted RBP16.58■□□□□ 0.24
CLK3-207ENST00000562389 TNFSF14O43557 240 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 LDOC1O95751 146 aaPredicted RBP16.58■□□□□ 0.24
CLK3-207ENST00000562389 GAS8O95995 478 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 FUCA1P04066 466 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 TPH1P17752 444 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 TPSB2P20231 275 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 KCNA4P22459 653 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 POLD2P49005 469 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 C1orf61Q13536 156 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 ITGA9Q13797 1035 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 PTPRCAPQ14761 206 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 TRIP13Q15645 432 aaPredicted RBP16.58■□□□□ 0.24
CLK3-207ENST00000562389 TPSAB1Q15661 275 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 FAM151BQ6UXP7 276 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 SYT10Q6XYQ8 523 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 GKN2Q86XP6 184 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 PHYKPLQ8IUZ5 450 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 DNAAF3Q8N9W5 541 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 FAM181AQ8N9Y4 354 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 PTCD2Q8WV60 388 aaKnown RBP16.58■□□□□ 0.24
CLK3-207ENST00000562389 SLCO2A1Q92959 643 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 CNDP2Q96KP4 475 aaKnown RBP16.58■□□□□ 0.24
CLK3-207ENST00000562389 CARS2Q9HA77 564 aaKnown RBP16.58■□□□□ 0.24
CLK3-207ENST00000562389 PIH1D1Q9NWS0 290 aaKnown RBP16.58■□□□□ 0.24
CLK3-207ENST00000562389 TMEM98Q9Y2Y6 226 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 KCTD3Q9Y597 815 aa16.58■□□□□ 0.24
CLK3-207ENST00000562389 CNOT1A5YKK6 2376 aaKnown RBP16.58■□□□□ 0.24
CLK3-207ENST00000562389 ZFC3H1O60293 1989 aaKnown RBP16.57■□□□□ 0.24
CLK3-207ENST00000562389 SPAARA0A1B0GVQ0 90 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 SIGLEC6O43699 453 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 DNAJC6O75061 913 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 SLC25A14O95258 325 aaPredicted RBP16.57■□□□□ 0.24
CLK3-207ENST00000562389 ASMTLO95671 621 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 ECEL1O95672 775 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 ANXA6P08133 673 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 CELA2BP08218 269 aaPredicted RBP16.57■□□□□ 0.24
CLK3-207ENST00000562389 HADHAP40939 763 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 GRIA1P42261 906 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 PAFAH1B1P43034 410 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 MAGEA6P43360 314 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 GNPDA1P46926 289 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 VPS41P49754 854 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 SIM1P81133 766 aaPredicted RBP16.57■□□□□ 0.24
CLK3-207ENST00000562389 CDK16Q00536 496 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 GPS1Q13098 491 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 POU6F1Q14863 301 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 CHRNA6Q15825 494 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 DEFB133Q30KQ1 61 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 PROX2Q3B8N5 592 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 ATP13A5Q4VNC0 1218 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 ZCCHC8Q6NZY4 707 aaKnown RBP16.57■□□□□ 0.24
CLK3-207ENST00000562389 LVRNQ6Q4G3 990 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 OR13C4Q8NGS5 318 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 DDX47Q9H0S4 455 aaKnown RBP16.57■□□□□ 0.24
CLK3-207ENST00000562389 TMEM168Q9H0V1 697 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 RMI1Q9H9A7 625 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 TRIM39Q9HCM9 518 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 SMOXQ9NWM0 555 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 TRNAU1APQ9NX07 287 aaKnown RBP16.57■□□□□ 0.24
CLK3-207ENST00000562389 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.57■□□□□ 0.24
CLK3-207ENST00000562389 PCYOX1Q9UHG3 505 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 FKBPLQ9UIM3 349 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 APPL1Q9UKG1 709 aa16.57■□□□□ 0.24
CLK3-207ENST00000562389 GPR89AB7ZAQ6 455 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 H7C0S8 307 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 CCDC188H7C350 402 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 AP3B1O00203 1094 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 YY2O15391 372 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 PRAMEF1O95521 474 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 GPR89BP0CG08 455 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 PSMA3P25788 255 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 XIAPP98170 497 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 LAMB3Q13751 1172 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 SEPT6Q14141 434 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 KCNJ11Q14654 390 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 KCTD19Q17RG1 926 aaPredicted RBP16.56■□□□□ 0.24
CLK3-207ENST00000562389 PYCR3Q53H96 274 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 C6orf132Q5T0Z8 1188 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 GPBAR1Q8TDU6 330 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 STYXQ8WUJ0 223 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 TRIM44Q96DX7 344 aaPredicted RBP16.56■□□□□ 0.24
CLK3-207ENST00000562389 DNAJC1Q96KC8 554 aaKnown RBP16.56■□□□□ 0.24
CLK3-207ENST00000562389 RUNDC3BQ96NL0 473 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 OR2M4Q96R27 311 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 RANBP9Q96S59 729 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 BOCQ9BWV1 1114 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 NLE1Q9NVX2 485 aaPredicted RBP16.56■□□□□ 0.24
CLK3-207ENST00000562389 TOR4AQ9NXH8 423 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 ATXN10Q9UBB4 475 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 TMPRSS11EQ9UL52 423 aa16.56■□□□□ 0.24
CLK3-207ENST00000562389 DOLKQ9UPQ8 538 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms