RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 C19orf43Q9BQ61 176 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 DPEP2Q9H4A9 486 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 OSGEPL1Q9H4B0 414 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 EBF2Q9HAK2 575 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 FSCN3Q9NQT6 498 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 DNAAF2Q9NVR5 837 aaKnown RBP10.64□□□□□ -0.71
TPM1-229ENST00000561242 IL17CQ9P0M4 197 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 TXNDC16Q9P2K2 825 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 GULP1Q9UBP9 304 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 APOBEC2Q9Y235 224 aaKnown RBP10.64□□□□□ -0.71
TPM1-229ENST00000561242 CSNK1G3Q9Y6M4 447 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 SPTBN5Q9NRC6 3674 aaKnown RBP10.64□□□□□ -0.71
TPM1-229ENST00000561242 PRSS38A1L453 326 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 CCDC78A2IDD5 438 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 KLHL33A6NCF5 533 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 PABPN1LA6NDY0 278 aaKnown RBP10.63□□□□□ -0.71
TPM1-229ENST00000561242 KMOO15229 486 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 FFAR2O15552 330 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 GRID2O43424 1007 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 SDC3O75056 442 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 TTC4O95801 387 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 CDK4P11802 303 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 ZNF7P17097 686 aaPredicted RBP10.63□□□□□ -0.71
TPM1-229ENST00000561242 MGAT1P26572 445 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 TRIM23P36406 574 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 ID4P47928 161 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 LRP8Q14114 963 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 HLTFQ14527 1009 aaKnown RBP eCLIP10.63□□□□□ -0.71
TPM1-229ENST00000561242 CHRNA6Q15825 494 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 CCDC38Q502W7 563 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 CERCAMQ5T4B2 595 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 TSTD2Q5T7W7 516 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 KCTD11Q693B1 232 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 TTC27Q6P3X3 843 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 LVRNQ6Q4G3 990 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 CHST15Q7LFX5 561 aaPredicted RBP10.63□□□□□ -0.71
TPM1-229ENST00000561242 LRRTM4Q86VH4 590 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 TRIM48Q8IWZ4 208 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 EID2Q8N6I1 236 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 PLA2G15Q8NCC3 412 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 GPR26Q8NDV2 337 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 FAM46DQ8NEK8 389 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 SLCO2A1Q92959 643 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 FUBP1Q96AE4 644 aaKnown RBP10.63□□□□□ -0.71
TPM1-229ENST00000561242 STAMBPL1Q96FJ0 436 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 RANBP9Q96S59 729 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 KLF6Q99612 283 aaPredicted RBP10.63□□□□□ -0.71
TPM1-229ENST00000561242 ERP44Q9BS26 406 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 TEX101Q9BY14 249 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 DPH5Q9H2P9 285 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 PARD6AQ9NPB6 346 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 IL26Q9NPH9 171 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 CASS4Q9NQ75 786 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 NLE1Q9NVX2 485 aaPredicted RBP10.63□□□□□ -0.71
TPM1-229ENST00000561242 PIH1D1Q9NWS0 290 aaKnown RBP10.63□□□□□ -0.71
TPM1-229ENST00000561242 VPS18Q9P253 973 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 TMEM98Q9Y2Y6 226 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 SNX24Q9Y343 169 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 SPO11Q9Y5K1 396 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 ZDBF2Q9HCK1 2354 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 REV3LO60673 3130 aa10.63□□□□□ -0.71
TPM1-229ENST00000561242 ATG2BQ96BY7 2078 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 ESPNB1AK53 854 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 SLC30A4O14863 429 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 PCDHGA12O60330 932 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 KDM1AO60341 852 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 SNX2O60749 519 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 WNT1P04628 370 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 IVLP07476 585 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 OR56A5P0C7T3 313 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 NME1P15531 152 aaKnown RBP10.62□□□□□ -0.71
TPM1-229ENST00000561242 IDSP22304 550 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 EPHA8P29322 1005 aaPredicted RBP10.62□□□□□ -0.71
TPM1-229ENST00000561242 DEKP35659 375 aaKnown RBP10.62□□□□□ -0.71
TPM1-229ENST00000561242 TTPAP49638 278 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 NOVA1P51513 510 aaKnown RBP10.62□□□□□ -0.71
TPM1-229ENST00000561242 TMEM115Q12893 351 aaPredicted RBP10.62□□□□□ -0.71
TPM1-229ENST00000561242 C1orf61Q13536 156 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 FZD2Q14332 565 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 PTPRRQ15256 657 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 HIF1AQ16665 826 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 FAM182AQ5T1J6 154 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 HENMT1Q5T8I9 393 aaKnown RBP10.62□□□□□ -0.71
TPM1-229ENST00000561242 RNF187Q5TA31 235 aaPredicted RBP10.62□□□□□ -0.71
TPM1-229ENST00000561242 PTRHD1Q6GMV3 140 aaKnown RBP10.62□□□□□ -0.71
TPM1-229ENST00000561242 NAXDQ8IW45 347 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 IFT20Q8IY31 132 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 OR6C4Q8NGE1 309 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 OR4L1Q8NH43 312 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 C1orf216Q8TAB5 229 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 DTX3LQ8TDB6 740 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 PYROXD1Q8WU10 500 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 CDKL2Q92772 493 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 HDAC10Q969S8 669 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 CDKN2AIPNLQ96HQ2 116 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 DNAJC1Q96KC8 554 aaKnown RBP10.62□□□□□ -0.71
TPM1-229ENST00000561242 TBATAQ96M53 351 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 VPS35Q96QK1 796 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 FOXP3Q9BZS1 431 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 CLPBQ9H078 707 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms