RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ABCG4Q9H172 646 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 ASCL3Q9NQ33 180 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 KCND1Q9NSA2 647 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 UBP1Q9NZI7 540 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 PKD2L2Q9NZM6 624 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 TAAR2Q9P1P5 351 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 APPL1Q9UKG1 709 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 TMEM98Q9Y2Y6 226 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 PLEKHM1Q9Y4G2 1056 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 AK5Q9Y6K8 562 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 RNF215Q9Y6U7 377 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 KNTC1P50748 2209 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 CCDC66A2RUB6 948 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 RGSL1A5PLK6 1076 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 HACD1B0YJ81 288 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 F5H423 210 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-224ENST00000556737 KIF2AO00139 706 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-224ENST00000556737 MTSS1O43312 755 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 PMPCBO75439 489 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 SLC4A1P02730 911 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 FGF1P05230 155 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 RPLP0P05388 317 aaKnown RBP10.25□□□□□ -0.77
SHMT2-224ENST00000556737 PYGLP06737 847 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 PNLIPP16233 465 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 GLB1P16278 677 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 EIF2S3P41091 472 aaKnown RBP10.25□□□□□ -0.77
SHMT2-224ENST00000556737 CHRNA4P43681 627 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 COPS2P61201 443 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 GABREP78334 506 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 CCL7P80098 99 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 SPIDRQ14159 915 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 NR1D2Q14995 579 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 COL28A1Q2UY09 1125 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 C3orf38Q5JPI3 329 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 SLC30A9Q6PML9 568 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 C19orf48Q6RUI8 117 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 IGF2-ASQ6U949 168 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 SYT10Q6XYQ8 523 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 MARK2Q7KZI7 788 aaKnown RBP10.25□□□□□ -0.77
SHMT2-224ENST00000556737 TMPRSS9Q7Z410 1059 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 TMC3Q7Z5M5 1100 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 SPRED1Q7Z699 444 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 CCNJLQ8IV13 435 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 NAGSQ8N159 534 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 GPR26Q8NDV2 337 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 PATE1Q8WXA2 126 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 HTR3CQ8WXA8 447 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 MRGPRX2Q96LB1 330 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 FCRL5Q96RD9 977 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 DPEP2Q9H4A9 486 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 FAM83DQ9H4H8 585 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 SYNDIG1Q9H7V2 258 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 C10orf88Q9H8K7 445 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 POLR1BQ9H9Y6 1135 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 ZFYVE1Q9HBF4 777 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 MAGEE1Q9HCI5 957 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 VPS18Q9P253 973 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 KLHL8Q9P2G9 620 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-224ENST00000556737 LHX6Q9UPM6 363 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 SATB2Q9UPW6 733 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 SHOC2Q9UQ13 582 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 EFR3BQ9Y2G0 817 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.25□□□□□ -0.77
SHMT2-224ENST00000556737 KIF26BQ2KJY2 2108 aa10.25□□□□□ -0.77
SHMT2-224ENST00000556737 LOC285095A0A1B0GVY8 99 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 AURKAO14965 403 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 DDX3YO15523 660 aaKnown RBP10.24□□□□□ -0.77
SHMT2-224ENST00000556737 NUDT21O43809 227 aaKnown RBP10.24□□□□□ -0.77
SHMT2-224ENST00000556737 ECEL1O95672 775 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 EML2O95834 649 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 ATP1A1P05023 1023 aaKnown RBP10.24□□□□□ -0.77
SHMT2-224ENST00000556737 PYGMP11217 842 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 BPIP17213 487 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 RBL1P28749 1068 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 CASQ1P31415 396 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 LSSP48449 732 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 WNT3AP56704 352 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 B4GALNT1Q00973 533 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 OTUD4Q01804 1114 aaKnown RBP10.24□□□□□ -0.77
SHMT2-224ENST00000556737 XRCC4Q13426 336 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 ALS2CLQ60I27 953 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 GALNT13Q8IUC8 556 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 TTC30BQ8N4P2 665 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 OR6C4Q8NGE1 309 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 ACTL9Q8TC94 416 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 CCHCR1Q8TD31 782 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 ZDHHC1Q8WTX9 485 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 LIN37Q96GY3 246 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-224ENST00000556737 CRELD1Q96HD1 420 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 GFM1Q96RP9 751 aaKnown RBP10.24□□□□□ -0.77
SHMT2-224ENST00000556737 VAT1Q99536 393 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 FAM118BQ9BPY3 351 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 OSBPL8Q9BZF1 889 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 GBA3Q9H227 469 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 LRRN3Q9H3W5 708 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 LRIT1Q9P2V4 623 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 FAM153AQ9UHL3 310 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 TMPRSS11EQ9UL52 423 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 PCDHGA8Q9Y5G5 932 aa10.24□□□□□ -0.77
SHMT2-224ENST00000556737 CAPN6Q9Y6Q1 641 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms