RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 IL36AQ9UHA7 158 aa9.08□□□□□ -0.96
GTF2A1-204ENST00000556268 PFDN2Q9UHV9 154 aa9.08□□□□□ -0.96
GTF2A1-204ENST00000556268 HOOK1Q9UJC3 728 aaKnown RBP9.08□□□□□ -0.96
GTF2A1-204ENST00000556268 ENTPD2Q9Y5L3 495 aa9.08□□□□□ -0.96
GTF2A1-204ENST00000556268 TRPM6Q9BX84 2022 aa9.08□□□□□ -0.96
GTF2A1-204ENST00000556268 PIEZO2Q9H5I5 2752 aa9.08□□□□□ -0.96
GTF2A1-204ENST00000556268 MAST4O15021 2626 aa9.08□□□□□ -0.96
GTF2A1-204ENST00000556268 MYO18BQ8IUG5 2567 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 SH3D21A4FU49 640 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 A6NNZ2 444 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 CYSRT1A8MQ03 144 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 HGSO14964 777 aaPredicted RBP9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 TSPAN6O43657 245 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 DAB1O75553 588 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 TCEA3O75764 348 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 C6P13671 934 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 ADRB3P13945 408 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 CDH5P33151 784 aaPredicted RBP9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 STAT5AP42229 794 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 GABRB2P47870 512 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 SNX16P57768 344 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 EIF2B5Q13144 721 aaKnown RBP9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 NME3Q13232 169 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 PTPN20Q4JDL3 420 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 CARD16Q5EG05 197 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 EMC4Q5J8M3 183 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 TPRG1LQ5T0D9 272 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 STEAP3Q658P3 488 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 OR6B2Q6IFH4 312 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 DPY19L2P1Q6NXN4 242 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 TRIM65Q6PJ69 517 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 CD300LDQ6UXZ3 194 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 LINGO4Q6UY18 593 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 ZDHHC17Q8IUH5 632 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 C1orf131Q8NDD1 294 aaKnown RBP9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 ZNF548Q8NEK5 533 aaPredicted RBP9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 MAPK15Q8TD08 544 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 ISG20Q96AZ6 181 aaKnown RBP9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 MED8Q96G25 268 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 ATXN7L3BQ96GX2 97 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 TBATAQ96M53 351 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 HAPLN3Q96S86 360 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 MYOCQ99972 504 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 HEPHQ9BQS7 1158 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 CRACR2AQ9BSW2 395 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 TKTL2Q9H0I9 626 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 DYRK4Q9NR20 520 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 MPP6Q9NZW5 540 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 SATB2Q9UPW6 733 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 SNX10Q9Y5X0 201 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 NAV2Q8IVL1 2488 aa9.07□□□□□ -0.96
GTF2A1-204ENST00000556268 RP1P56715 2156 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 GTPBP10A4D1E9 387 aaKnown RBP9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 GOLGA6L4A6NEF3 574 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 IGLON5A6NGN9 336 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 LMO7DNF2Z398 122 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 FOXN3O00409 490 aaPredicted RBP9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 NTN3O00634 580 aaPredicted RBP9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 AREL1O15033 823 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 AQP9O43315 295 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 GCATO75600 419 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 ENDOD1O94919 500 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 RHOCP08134 193 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 PON1P27169 355 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 RBMS1P29558 406 aaKnown RBP9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 OR1E1P30953 314 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 NEK3P51956 506 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 APBA1Q02410 837 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 SERINC3Q13530 473 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 LY6DQ14210 128 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 CDKN3Q16667 212 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 SLC25A52Q3SY17 297 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 KLHL10Q6JEL2 608 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 RETSATQ6NUM9 610 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 GUSBP11Q6P575 273 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 C22orf39Q6P5X5 142 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 LRRC31Q6UY01 552 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 ARCQ7LC44 396 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 EFL1Q7Z2Z2 1120 aaKnown RBP9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 CLEC14AQ86T13 490 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 ZC3H18Q86VM9 953 aaKnown RBP9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 PARGQ86W56 976 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 FAM71AQ8IYT1 594 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 PCDH20Q8N6Y1 951 aaKnown RBP9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 OR7D4Q8NG98 312 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 WDR48Q8TAF3 677 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 RAB7BQ96AH8 199 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 PPP1R16AQ96I34 528 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 RETREG1Q9H6L5 497 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 SIX2Q9NPC8 291 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 SIRPGQ9P1W8 387 aa9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 PNMA8BQ9ULN7 279 aaPredicted RBP9.06□□□□□ -0.96
GTF2A1-204ENST00000556268 AHCTF1Q8WYP5 2266 aa9.05□□□□□ -0.96
GTF2A1-204ENST00000556268 CPED1A4D0V7 1026 aa9.05□□□□□ -0.96
GTF2A1-204ENST00000556268 C16orf96A6NNT2 1141 aa9.05□□□□□ -0.96
GTF2A1-204ENST00000556268 FPGTO14772 594 aa9.05□□□□□ -0.96
GTF2A1-204ENST00000556268 NOBOXO60393 691 aa9.05□□□□□ -0.96
GTF2A1-204ENST00000556268 FGFR1OPO95684 399 aaKnown RBP9.05□□□□□ -0.96
GTF2A1-204ENST00000556268 USP8P40818 1118 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms