RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 IL1R1P14778 569 aa11.9□□□□□ -0.5
RBFOX1-208ENST00000547372 STMN1P16949 149 aa11.9□□□□□ -0.5
RBFOX1-208ENST00000547372 MCCD1P59942 119 aaPredicted RBP11.9□□□□□ -0.5
RBFOX1-208ENST00000547372 TPRG1LQ5T0D9 272 aa11.9□□□□□ -0.5
RBFOX1-208ENST00000547372 IDO2Q6ZQW0 420 aa11.9□□□□□ -0.5
RBFOX1-208ENST00000547372 GALNT5Q7Z7M9 940 aa11.9□□□□□ -0.5
RBFOX1-208ENST00000547372 ADGRG5Q8IZF4 528 aa11.9□□□□□ -0.5
RBFOX1-208ENST00000547372 RDH11Q8TC12 318 aa11.9□□□□□ -0.5
RBFOX1-208ENST00000547372 GMCL1Q96IK5 515 aa11.9□□□□□ -0.5
RBFOX1-208ENST00000547372 TMEM74Q96NL1 305 aa11.9□□□□□ -0.5
RBFOX1-208ENST00000547372 TBCBQ99426 244 aa11.9□□□□□ -0.5
RBFOX1-208ENST00000547372 SMOC2Q9H3U7 446 aa11.9□□□□□ -0.5
RBFOX1-208ENST00000547372 HCN4Q9Y3Q4 1203 aa11.9□□□□□ -0.5
RBFOX1-208ENST00000547372 MFHAS1Q9Y4C4 1052 aa11.9□□□□□ -0.5
RBFOX1-208ENST00000547372 AKR7A2O43488 359 aa11.9□□□□□ -0.51
RBFOX1-208ENST00000547372 RECQL5O94762 991 aaPredicted RBP11.9□□□□□ -0.51
RBFOX1-208ENST00000547372 FTH1P02794 183 aa11.9□□□□□ -0.51
RBFOX1-208ENST00000547372 HTR1AP08908 422 aa11.9□□□□□ -0.51
RBFOX1-208ENST00000547372 MAGEA3P43357 314 aa11.9□□□□□ -0.51
RBFOX1-208ENST00000547372 ARSFP54793 590 aa11.9□□□□□ -0.51
RBFOX1-208ENST00000547372 CD47Q08722 323 aa11.9□□□□□ -0.51
RBFOX1-208ENST00000547372 SPESP1Q6UW49 350 aa11.9□□□□□ -0.51
RBFOX1-208ENST00000547372 FSTL5Q8N475 847 aaPredicted RBP11.9□□□□□ -0.51
RBFOX1-208ENST00000547372 ANKRD52Q8NB46 1076 aa11.9□□□□□ -0.51
RBFOX1-208ENST00000547372 ANGPTL6Q8NI99 470 aa11.9□□□□□ -0.51
RBFOX1-208ENST00000547372 ELMO2Q96JJ3 720 aa11.9□□□□□ -0.51
RBFOX1-208ENST00000547372 MMP28Q9H239 520 aa11.9□□□□□ -0.51
RBFOX1-208ENST00000547372 ZNF304Q9HCX3 659 aa11.9□□□□□ -0.51
RBFOX1-208ENST00000547372 JPH1Q9HDC5 661 aaPredicted RBP11.9□□□□□ -0.51
RBFOX1-208ENST00000547372 POLR3BQ9NW08 1133 aaPredicted RBP11.9□□□□□ -0.51
RBFOX1-208ENST00000547372 GGA3Q9NZ52 723 aa11.9□□□□□ -0.51
RBFOX1-208ENST00000547372 TMEM181Q9P2C4 612 aa11.9□□□□□ -0.51
RBFOX1-208ENST00000547372 MTF2Q9Y483 593 aaPredicted RBP11.9□□□□□ -0.51
RBFOX1-208ENST00000547372 NUPL2O15504 423 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 KPNA6O60684 536 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 H2AFYO75367 372 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 ITGB3P05106 788 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 NR3C2P08235 984 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 GSTM1P09488 218 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 TCF3P15923 654 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 CD36P16671 472 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 YBX3P16989 372 aaKnown RBP eCLIP11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 ZNF37AP17032 561 aaPredicted RBP11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 CTRB1P17538 263 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 TM4SF1P30408 202 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 RFC2P35250 354 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 CDC20Q12834 499 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 SIM2Q14190 667 aaPredicted RBP11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 ZNF404Q494X3 552 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 PYCR3Q53H96 274 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 CTRB2Q6GPI1 263 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 RETREG3Q86VR2 466 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 ZDHHC13Q8IUH4 622 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 OR52K1Q8NGK4 314 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 SEPT1Q8WYJ6 367 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 TMBIM1Q969X1 311 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 CGRRF1Q99675 332 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 YTHDF1Q9BYJ9 559 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 NTN4Q9HB63 628 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 NRBP2Q9NSY0 501 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 ZNF224Q9NZL3 707 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 CNTN6Q9UQ52 1028 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 A0A0J9YYE9 177 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 H3BMM5 538 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 MED26O95402 600 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 CSF2P04141 144 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 YES1P07947 543 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 JUNBP17275 347 aaPredicted RBP11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 APLP1P51693 650 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 C1QTNF8P60827 252 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 YWHAHQ04917 246 aaPredicted RBP11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 DBPQ10586 325 aaPredicted RBP11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 AMHR2Q16671 573 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 SPANXN2Q5MJ10 180 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 FBXL6Q8N531 539 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 MCMBPQ9BTE3 642 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 ROGDIQ9GZN7 287 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 PDZD7Q9H5P4 517 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 ATPIF1Q9UII2 106 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 DNMT3AQ9Y6K1 912 aaPredicted RBP11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 PCNTO95613 3336 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 ZNF541Q9H0D2 1346 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 SMCHD1A6NHR9 2005 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 LOC110117498-PIK3R3F6TDL0 507 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 GSTA4O15217 222 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 OGTO15294 1046 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 DLX3O60479 287 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 CLEC2LP0C7M8 214 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 MAGEA6P43360 314 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 SNX16P57768 344 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 TAGLNQ01995 201 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 EIF2B5Q13144 721 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 SELPLGQ14242 412 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 CSHL1Q14406 222 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 CNSTQ6PJW8 725 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 ZNF517Q6ZMY9 492 aaPredicted RBP11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 NOXA1Q86UR1 476 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 SIAH1Q8IUQ4 282 aa11.89□□□□□ -0.51
RBFOX1-208ENST00000547372 PARP16Q8N5Y8 322 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms