RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 NSMCE1Q8WV22 266 aa17.25■□□□□ 0.35
RBFOX1-207ENST00000547338 NSL1Q96IY1 281 aa17.25■□□□□ 0.35
RBFOX1-207ENST00000547338 CELF6Q96J87 481 aaKnown RBP17.25■□□□□ 0.35
RBFOX1-207ENST00000547338 RANBP9Q96S59 729 aa17.25■□□□□ 0.35
RBFOX1-207ENST00000547338 MCMBPQ9BTE3 642 aa17.25■□□□□ 0.35
RBFOX1-207ENST00000547338 HEY2Q9UBP5 337 aa17.25■□□□□ 0.35
RBFOX1-207ENST00000547338 VPS51Q9UID3 782 aa17.25■□□□□ 0.35
RBFOX1-207ENST00000547338 HS3ST2Q9Y278 367 aa17.25■□□□□ 0.35
RBFOX1-207ENST00000547338 ADAMTS9Q9P2N4 1935 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 K7ERQ8 282 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 ZMPSTE24O75844 475 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 HAUS5O94927 633 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 SNUPNO95149 360 aaKnown RBP17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 RHOCP08134 193 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 HK2P52789 917 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 CST6Q15828 149 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 FASTKD1Q53R41 847 aaKnown RBP17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 TRIM61Q5EBN2 209 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 N4BP2L1Q5TBK1 243 aaPredicted RBP17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 STPG1Q5TH74 334 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 SLC23A3Q6PIS1 610 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 MTDHQ86UE4 582 aaKnown RBP17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 CADM4Q8NFZ8 388 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 RFWD2Q8NHY2 731 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 C1orf216Q8TAB5 229 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 DNASE2BQ8WZ79 361 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 SKA1Q96BD8 255 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 EDEM2Q9BV94 578 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 TMEM120AQ9BXJ8 343 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 MUC3BQ9H195 1237 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 C6orf106Q9H6K1 298 aaPredicted RBP17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 CAPN10Q9HC96 672 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 C20orf96Q9NUD7 363 aaPredicted RBP17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 RBM22Q9NW64 420 aaKnown RBP eCLIP17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 IPO11Q9UI26 975 aaKnown RBP17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 GGT7Q9UJ14 662 aa17.24■□□□□ 0.35
RBFOX1-207ENST00000547338 A0A0G2JND7 137 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 DCDC2BA2VCK2 349 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 METTL12A8MUP2 240 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 KHNYNO15037 678 aaKnown RBP17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 MID1O15344 667 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 SMAD6O43541 496 aaKnown RBP17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 NDUFS2O75306 463 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 ATP6V1G2O95670 118 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 PROCP04070 461 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 ACADMP11310 421 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 SRCP12931 536 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 CALB2P22676 271 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 OXTRP30559 389 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 HOXD12P35452 270 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 MAPKAPK2P49137 400 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 PAPOLAP51003 745 aaKnown RBP17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 PARP15Q460N3 678 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 TAF1BQ53T94 588 aaPredicted RBP17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 CERCAMQ5T4B2 595 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 SWT1Q5T5J6 900 aaKnown RBP17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 RANBP10Q6VN20 620 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 KIAA0408Q6ZU52 694 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 MMAAQ8IVH4 418 aaKnown RBP17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 LMNTD2Q8IXW0 634 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 AADATQ8N5Z0 425 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 DCAF4L2Q8NA75 395 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 PPP4R1Q8TF05 950 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 TSNARE1Q96NA8 513 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 TRIM56Q9BRZ2 755 aaKnown RBP17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 RTKNQ9BST9 563 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 C12orf65Q9H3J6 166 aaKnown RBP17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 RHOJQ9H4E5 214 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 SNX15Q9NRS6 342 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 DCTN4Q9UJW0 460 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 SARDHQ9UL12 918 aa17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 ASCC3Q8N3C0 2202 aaKnown RBP17.23■□□□□ 0.35
RBFOX1-207ENST00000547338 ILVBLA1L0T0 632 aa17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 ZNF821O75541 412 aaPredicted RBP17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 CD160O95971 181 aa17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 DNTTP04053 509 aa17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 T-ENOLP0DO92 83 aa17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 CCND1P24385 295 aa17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 OR1E1P30953 314 aa17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 DLG2Q15700 870 aa17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 LINGO4Q6UY18 593 aa17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 Q6ZVU0 165 aa17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 UNC5BQ8IZJ1 945 aa17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 TEX26Q8N6G2 289 aa17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 NETO2Q8NC67 525 aa17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 CALML6Q8TD86 181 aa17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 STON2Q8WXE9 905 aa17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 GPR22Q99680 433 aa17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 ORAI3Q9BRQ5 295 aa17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 NOL6Q9H6R4 1146 aaKnown RBP17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 COPG2Q9UBF2 871 aa17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 ACTL7AQ9Y615 435 aa17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 KNL1Q8NG31 2342 aa17.22■□□□□ 0.35
RBFOX1-207ENST00000547338 TMEM114B3SHH9 223 aa17.21■□□□□ 0.35
RBFOX1-207ENST00000547338 F5H423 210 aaPredicted RBP17.21■□□□□ 0.35
RBFOX1-207ENST00000547338 USP12O75317 370 aa17.21■□□□□ 0.35
RBFOX1-207ENST00000547338 GSRP00390 522 aa17.21■□□□□ 0.35
RBFOX1-207ENST00000547338 MYL2P10916 166 aa17.21■□□□□ 0.35
RBFOX1-207ENST00000547338 DRD3P35462 400 aa17.21■□□□□ 0.35
RBFOX1-207ENST00000547338 ACVRL1P37023 503 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms