RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 PYCR3Q53H96 274 aa15.6■□□□□ 0.09
CCDC78-216ENST00000544996 PERM1Q5SV97 790 aa15.6■□□□□ 0.09
CCDC78-216ENST00000544996 CDCP2Q5VXM1 449 aa15.6■□□□□ 0.09
CCDC78-216ENST00000544996 SLC30A9Q6PML9 568 aa15.6■□□□□ 0.09
CCDC78-216ENST00000544996 GPR156Q8NFN8 814 aa15.6■□□□□ 0.09
CCDC78-216ENST00000544996 SLC35B2Q8TB61 432 aa15.6■□□□□ 0.09
CCDC78-216ENST00000544996 PTCD2Q8WV60 388 aaKnown RBP15.6■□□□□ 0.09
CCDC78-216ENST00000544996 ANP32BQ92688 251 aaKnown RBP15.6■□□□□ 0.09
CCDC78-216ENST00000544996 PLEKHG4BQ96PX9 1271 aa15.6■□□□□ 0.09
CCDC78-216ENST00000544996 CARD9Q9H257 536 aa15.6■□□□□ 0.09
CCDC78-216ENST00000544996 BPIFA1Q9NP55 256 aa15.6■□□□□ 0.09
CCDC78-216ENST00000544996 SPATS2LQ9NUQ6 558 aaKnown RBP15.6■□□□□ 0.09
CCDC78-216ENST00000544996 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.6■□□□□ 0.09
CCDC78-216ENST00000544996 TAAR2Q9P1P5 351 aa15.6■□□□□ 0.09
CCDC78-216ENST00000544996 CNOT6Q9ULM6 557 aaKnown RBP15.6■□□□□ 0.09
CCDC78-216ENST00000544996 R3HDM2Q9Y2K5 976 aaKnown RBP15.6■□□□□ 0.09
CCDC78-216ENST00000544996 PPP2R2CQ9Y2T4 447 aa15.6■□□□□ 0.09
CCDC78-216ENST00000544996 CEP295Q9C0D2 2601 aa15.6■□□□□ 0.09
CCDC78-216ENST00000544996 ACACBO00763 2458 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 TCRBV7S2A1N4TA0A589 114 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 GPR89AB7ZAQ6 455 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 PPFIA2O75334 1257 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 GPR89BP0CG08 455 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 GLB1P16278 677 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 AK4P27144 223 aaPredicted RBP15.59■□□□□ 0.09
CCDC78-216ENST00000544996 STIP1P31948 543 aaKnown RBP15.59■□□□□ 0.09
CCDC78-216ENST00000544996 ACTR1BP42025 376 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 ACTR1AP61163 376 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 BIRC2Q13490 618 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 PARP6Q2NL67 630 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 P3H1Q32P28 736 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 C14orf28Q4W4Y0 310 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 CERCAMQ5T4B2 595 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 RANBP10Q6VN20 620 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 NRROSQ86YC3 692 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 SLC13A5Q86YT5 568 aaPredicted RBP15.59■□□□□ 0.09
CCDC78-216ENST00000544996 PHYKPLQ8IUZ5 450 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 GLYATL1Q969I3 302 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 CCDC74AQ96AQ1 378 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 NXPE2Q96DL1 559 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 GORASP1Q9BQQ3 440 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 TMEM121Q9BTD3 319 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 TRIM39Q9HCM9 518 aa15.59■□□□□ 0.09
CCDC78-216ENST00000544996 OAS3Q9Y6K5 1087 aaKnown RBP15.59■□□□□ 0.09
CCDC78-216ENST00000544996 C2orf81A6NN90 581 aa15.58■□□□□ 0.08
CCDC78-216ENST00000544996 NOBOXO60393 691 aa15.58■□□□□ 0.08
CCDC78-216ENST00000544996 CSO75390 466 aaKnown RBP15.58■□□□□ 0.08
CCDC78-216ENST00000544996 TCEA3O75764 348 aa15.58■□□□□ 0.08
CCDC78-216ENST00000544996 ADRA1AP35348 466 aa15.58■□□□□ 0.08
CCDC78-216ENST00000544996 SPAM1P38567 509 aa15.58■□□□□ 0.08
CCDC78-216ENST00000544996 SPIDRQ14159 915 aa15.58■□□□□ 0.08
CCDC78-216ENST00000544996 RBM44Q6ZP01 1051 aaKnown RBP15.58■□□□□ 0.08
CCDC78-216ENST00000544996 TTC30BQ8N4P2 665 aa15.58■□□□□ 0.08
CCDC78-216ENST00000544996 ZDHHC1Q8WTX9 485 aa15.58■□□□□ 0.08
CCDC78-216ENST00000544996 GRAMD1AQ96CP6 724 aa15.58■□□□□ 0.08
CCDC78-216ENST00000544996 APOL2Q9BQE5 337 aa15.58■□□□□ 0.08
CCDC78-216ENST00000544996 NRSN2Q9GZP1 204 aa15.58■□□□□ 0.08
CCDC78-216ENST00000544996 SYNDIG1Q9H7V2 258 aa15.58■□□□□ 0.08
CCDC78-216ENST00000544996 IL17CQ9P0M4 197 aa15.58■□□□□ 0.08
CCDC78-216ENST00000544996 LRIT1Q9P2V4 623 aa15.58■□□□□ 0.08
CCDC78-216ENST00000544996 FEZ2Q9UHY8 353 aaPredicted RBP15.58■□□□□ 0.08
CCDC78-216ENST00000544996 ZMIZ1Q9ULJ6 1067 aa15.58■□□□□ 0.08
CCDC78-216ENST00000544996 AK5Q9Y6K8 562 aa15.58■□□□□ 0.08
CCDC78-216ENST00000544996 SPEGQ15772 3267 aa15.58■□□□□ 0.08
CCDC78-216ENST00000544996 CHD8Q9HCK8 2581 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 STX7O15400 261 aaKnown RBP15.57■□□□□ 0.08
CCDC78-216ENST00000544996 PSMD3O43242 534 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 ZW10O43264 779 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 GRID2O43424 1007 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 NUDT21O43809 227 aaKnown RBP15.57■□□□□ 0.08
CCDC78-216ENST00000544996 NUAK1O60285 661 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 DNAJC6O75061 913 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 PNLIPP16233 465 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 ACTN2P35609 894 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 PDE1BQ01064 536 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 HLTFQ14527 1009 aaKnown RBP eCLIP15.57■□□□□ 0.08
CCDC78-216ENST00000544996 CHST15Q7LFX5 561 aaPredicted RBP15.57■□□□□ 0.08
CCDC78-216ENST00000544996 GDAP1Q8TB36 358 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 MDM1Q8TC05 714 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 DTX3LQ8TDB6 740 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 ATG4AQ8WYN0 398 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 VPS35Q96QK1 796 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 TBL1YQ9BQ87 522 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 OR2AG1Q9H205 316 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 ARFGAP3Q9NP61 516 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 IL26Q9NPH9 171 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 ATXN10Q9UBB4 475 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 DKK4Q9UBT3 224 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 APPL1Q9UKG1 709 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 ZNF148Q9UQR1 794 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 PRKAB1Q9Y478 270 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 PLEKHM1Q9Y4G2 1056 aa15.57■□□□□ 0.08
CCDC78-216ENST00000544996 TPRP12270 2363 aaKnown RBP15.57■□□□□ 0.08
CCDC78-216ENST00000544996 GLYATL1P3A0A0U1RQE8 302 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 RHPN2P1A8MT19 583 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 LIASO43766 372 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 VEGFDO43915 354 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 USP12O75317 370 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 CRTAMO95727 393 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 CAPNS1P04632 268 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 690.7 ms