RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 PIH1D2Q8WWB5 315 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 DNAJC9Q8WXX5 260 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 NAF1Q96HR8 494 aaKnown RBP13.5□□□□□ -0.25
SMG6-203ENST00000536871 NSMCE3Q96MG7 304 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 BIRC8Q96P09 236 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 CATSPER2Q96P56 530 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 LYSMD1Q96S90 227 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 UNKQ9C0B0 810 aaKnown RBP13.5□□□□□ -0.25
SMG6-203ENST00000536871 CEP44Q9C0F1 390 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 TMEM45AQ9NWC5 275 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 COPG1Q9Y678 874 aaKnown RBP13.5□□□□□ -0.25
SMG6-203ENST00000536871 A0A0J9YYE9 177 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 SUPT3HB4E1H0 165 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 TBX10O75333 385 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 SUPT3HO75486 399 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 SMNDC1O75940 238 aaKnown RBP eCLIP13.49□□□□□ -0.25
SMG6-203ENST00000536871 CHEK2O96017 543 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 GLUD1P00367 558 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 TRBC1P01850 177 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 MTHFD2P13995 350 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 ATP6V1C1P21283 382 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 PEX6Q13608 980 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 DMC1Q14565 340 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 LRRC26Q2I0M4 334 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 PLEKHG6Q3KR16 790 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 ARHGAP15Q53QZ3 475 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 GRAMD4Q6IC98 578 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 CAPRIN2Q6IMN6 1127 aaKnown RBP13.49□□□□□ -0.25
SMG6-203ENST00000536871 DSELQ8IZU8 1212 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 RBFAQ8N0V3 343 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 GRIN3AQ8TCU5 1115 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 AUTS2Q8WXX7 1259 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 SPDL1Q96EA4 605 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 C19orf60Q96EN9 201 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 GPR21Q99679 349 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 SLC25A23Q9BV35 468 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 ZFYVE1Q9HBF4 777 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 FCF1Q9Y324 198 aaKnown RBP13.49□□□□□ -0.25
SMG6-203ENST00000536871 RWDD3Q9Y3V2 267 aa13.49□□□□□ -0.25
SMG6-203ENST00000536871 TNPO3Q9Y5L0 923 aaKnown RBP13.49□□□□□ -0.25
SMG6-203ENST00000536871 BBIP1A8MTZ0 92 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 PSMD12O00232 456 aaPredicted RBP13.48□□□□□ -0.25
SMG6-203ENST00000536871 AIM2O14862 343 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 AZIN1O14977 448 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 ANPEPP15144 967 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 NFKBIAP25963 317 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 CA8P35219 290 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 RGS4P49798 205 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 EPHA5P54756 1037 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 XIAPP98170 497 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 GRIK2Q13002 908 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 PPIGQ13427 754 aaKnown RBP eCLIP13.48□□□□□ -0.253e-6■■□□□ 13.5
SMG6-203ENST00000536871 OR4D1Q15615 310 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 PFKFB4Q16877 469 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 SLC5A9Q2M3M2 681 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 METTL2BQ6P1Q9 378 aaKnown RBP13.48□□□□□ -0.25
SMG6-203ENST00000536871 ZFP1Q6P2D0 407 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 HACD2Q6Y1H2 254 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 TAS2R42Q7RTR8 314 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 SNX20Q7Z614 316 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 ADAMTSL2Q86TH1 951 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 PAF1Q8N7H5 531 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 OR2AP1Q8NGE2 309 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 MICAL1Q8TDZ2 1067 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 DLG3Q92796 817 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 SHCBP1LQ9BZQ2 653 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 CLPBQ9H078 707 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 P2RY12Q9H244 342 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 S100A14Q9HCY8 104 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 NUDT4Q9NZJ9 180 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 KLHL42Q9P2K6 505 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 GNPTGQ9UJJ9 305 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 POMPQ9Y244 141 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 FAM50BQ9Y247 325 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 MED16Q9Y2X0 877 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 DHRS7Q9Y394 339 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 PLXNA4Q9HCM2 1894 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 KIAA1671Q9BY89 1806 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 TRIM43BA6NCK2 446 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 UBXN8O00124 270 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 LEFTY2O00292 366 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 GRM6O15303 877 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 SNX2O60749 519 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 CLASP2O75122 1294 aaKnown RBP13.48□□□□□ -0.25
SMG6-203ENST00000536871 SKAP2O75563 359 aaPredicted RBP13.48□□□□□ -0.25
SMG6-203ENST00000536871 RPS17P08708 135 aaKnown RBP13.48□□□□□ -0.25
SMG6-203ENST00000536871 CHRM3P20309 590 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 KCNC1P48547 511 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 PSMD8P48556 350 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 CYP4F8P98187 520 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 LMAN2Q12907 356 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 PPM1LQ5SGD2 360 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 KANK2Q63ZY3 851 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 PSAPL1Q6NUJ1 521 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 LARP4Q71RC2 724 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMG6-203ENST00000536871 PLPP6Q8IY26 295 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 RIN3Q8TB24 985 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 TSPEARQ8WU66 669 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 TRIM43Q96BQ3 446 aaPredicted RBP13.48□□□□□ -0.25
SMG6-203ENST00000536871 PAWRQ96IZ0 340 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms