RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 CLEC4FQ8N1N0 589 aa13.84□□□□□ -0.19
LPCAT3-203ENST00000535479 OR6K2Q8NGY2 324 aa13.84□□□□□ -0.19
LPCAT3-203ENST00000535479 PRM3Q9NNZ6 103 aa13.84□□□□□ -0.19
LPCAT3-203ENST00000535479 TRNAU1APQ9NX07 287 aaKnown RBP13.84□□□□□ -0.19
LPCAT3-203ENST00000535479 RNF112Q9ULX5 631 aa13.84□□□□□ -0.19
LPCAT3-203ENST00000535479 A0A0G2JMZ2 1700 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 LRRC37A2A6NM11 1700 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 NCAM2O15394 837 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 SH3BGRLO75368 114 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 TOMM70O94826 608 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 MMP2P08253 660 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 IMPDH1P20839 514 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 PSEN2P49810 448 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 MEP1AQ16819 746 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 GTDC1Q4AE62 458 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 MARC1Q5VT66 337 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 GALNT5Q7Z7M9 940 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 ERI1Q8IV48 349 aaKnown RBP13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 PHACTR4Q8IZ21 702 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 SLC15A4Q8N697 577 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 FNDC5Q8NAU1 212 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 RMDN1Q96DB5 314 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 EFHD1Q9BUP0 239 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 MIR1-1HGQ9H1L0 117 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 EPB41L1Q9H4G0 881 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 VTA1Q9NP79 307 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 ZNF225Q9UK10 706 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 ACOX3O15254 700 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 DIRAS1O95057 198 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 MLYCDO95822 493 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 PENKP01210 267 aaPredicted RBP13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 GSNP06396 782 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 CD1DP15813 335 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 IL10P22301 178 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 MAP4P27816 1152 aaKnown RBP13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 RGRP47804 291 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 CBLBQ13191 982 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 HERC3Q15034 1050 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 CYP2A13Q16696 494 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 ACBD5Q5T8D3 534 aaPredicted RBP13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 ENPP6Q6UWR7 440 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 FNDC8Q8TC99 324 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 BRI3BPQ8WY22 251 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 IL12RB2Q99665 862 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 GPR21Q99679 349 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 CHID1Q9BWS9 393 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 ANKRD60Q9BZ19 345 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 ZFP14Q9HCL3 533 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 SACM1LQ9NTJ5 587 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 SLC38A7Q9NVC3 462 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 TBC1D13Q9NVG8 400 aa13.83□□□□□ -0.2
LPCAT3-203ENST00000535479 NYNRINQ9P2P1 1898 aaKnown RBP13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 A0A087X1B8 175 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 KANSL1LA0AUZ9 987 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 ZSCAN9O15535 394 aaPredicted RBP13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 SYNCRIPO60506 623 aaKnown RBP13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 TLR5O60602 858 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 FUCA1P04066 466 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 HSPA1AP0DMV8 641 aaKnown RBP13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 HSPA1BP0DMV9 641 aaKnown RBP13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 HSPA8P11142 646 aaKnown RBP13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 SLC2A3P11169 496 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 KCNE1P15382 129 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 CCNCP24863 283 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 TPD52P55327 224 aaPredicted RBP13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 SCAPQ12770 1279 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 PPP4R4Q6NUP7 873 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 KDELC1Q6UW63 502 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 LINGO4Q6UY18 593 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 SYVN1Q86TM6 617 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 RAVER1Q8IY67 606 aaKnown RBP13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 LZTR1Q8N653 840 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 OR7D4Q8NG98 312 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 RPRD1AQ96P16 312 aaPredicted RBP13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 OSBPL6Q9BZF3 934 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 ING2Q9H160 280 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.82□□□□□ -0.27e-6■□□□□ 11.3
LPCAT3-203ENST00000535479 IFT80Q9P2H3 777 aaPredicted RBP13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 FAM8A1Q9UBU6 413 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 VPS28Q9UK41 221 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 DERAQ9Y315 318 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 PCDHGC4Q9Y5F7 938 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 SPO11Q9Y5K1 396 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 TNS1Q9HBL0 1735 aaKnown RBP13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 CXCL11O14625 94 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 CD3EAPO15446 510 aaKnown RBP13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 HSPA13P48723 471 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 RFTN1Q14699 578 aaPredicted RBP13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 PATL1Q86TB9 770 aaKnown RBP13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 GFM2Q969S9 779 aaKnown RBP13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 BIRC7Q96CA5 298 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 UBXN10Q96LJ8 280 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 GMIPQ9P107 970 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 CIDEBQ9UHD4 219 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 MIA3Q5JRA6 1907 aa13.82□□□□□ -0.2
LPCAT3-203ENST00000535479 ARVCFO00192 962 aa13.81□□□□□ -0.2
LPCAT3-203ENST00000535479 ECI2O75521 394 aa13.81□□□□□ -0.2
LPCAT3-203ENST00000535479 MASP1P48740 699 aa13.81□□□□□ -0.2
LPCAT3-203ENST00000535479 HERVK_113P63132 956 aa13.81□□□□□ -0.2
LPCAT3-203ENST00000535479 CLCQ05315 142 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms