RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	TAS2R14	Q9NYV8	317 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	PCSK1N	Q9UHG2	260 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	CAPN11	Q9UMQ6	739 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	PCDHGC4	Q9Y5F7	938 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	ZSCAN12	O43309	604 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	MAFK	O60675	156 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	THRA	P10827	490 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	TNFAIP3	P21580	790 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	LHCGR	P22888	699 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	AK4	P27144	223 aa	Predicted RBP	11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	UGT1A3	P35503	534 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	PCK1	P35558	622 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	ETV3	P41162	512 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	GNPDA1	P46926	289 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	FASLG	P48023	281 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	CYP4F2	P78329	520 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	ZBED6	P86452	979 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	SRSF1	Q07955	248 aa	Known RBP eCLIP	11.49	□□□□□ -0.57	1e-7	■□□□□ 10.7
CTNND1-238	ENST00000534647	LRP8	Q14114	963 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	DPYSL2	Q16555	572 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	PPP6R3	Q5H9R7	873 aa	Predicted RBP	11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	TMEM71	Q6P5X7	295 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	BORA	Q6PGQ7	559 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	ADAMTSL4	Q6UY14	1074 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647		Q6ZVL8	140 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	HSD11B1L	Q7Z5J1	315 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	LRRC49	Q8IUZ0	686 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	PGBD5	Q8N414	524 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	RCBTB1	Q8NDN9	531 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	FBF1	Q8TES7	1133 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	FRMD6	Q96NE9	622 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	CATSPER2	Q96P56	530 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	TEFM	Q96QE5	360 aa	Known RBP	11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	ZWILCH	Q9H900	591 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	NOD2	Q9HC29	1040 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	B3GALT1	Q9Y5Z6	326 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	BOD1L1	Q8NFC6	3051 aa		11.49	□□□□□ -0.57
CTNND1-238	ENST00000534647	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	PTPN13	Q12923	2485 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	NPIPB15	A6NHN6	443 aa	Predicted RBP	11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	LRCH4	O75427	683 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	PGLS	O95336	258 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	SOD1	P00441	154 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	CP	P00450	1065 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	PYGL	P06737	847 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	CSTF2	P33240	577 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	RAB15	P59190	212 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	NFKB2	Q00653	900 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	ZNF235	Q14590	738 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	PYCR3	Q53H96	274 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	BOLA3	Q53S33	107 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	COLEC12	Q5KU26	742 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	SLC30A9	Q6PML9	568 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	WDR74	Q6RFH5	385 aa	Predicted RBP	11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	USP45	Q70EL2	814 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	ZNF765	Q7L2R6	523 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	POLN	Q7Z5Q5	900 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	TP53INP2	Q8IXH6	220 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	BBS5	Q8N3I7	341 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	BMPER	Q8N8U9	685 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	PIH1D2	Q8WWB5	315 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	PATE1	Q8WXA2	126 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	ART4	Q93070	314 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	SLC45A3	Q96JT2	553 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	PRR14	Q9BWN1	585 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	TRIM4	Q9C037	500 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	KCND1	Q9NSA2	647 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	SLC39A1	Q9NY26	324 aa		11.48	□□□□□ -0.57
CTNND1-238	ENST00000534647	ANKRD36	A6QL64	1941 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	TTC24	A2A3L6	582 aa	Predicted RBP	11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	GOLGA6L9	A6NEM1	432 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647		H3BRJ5	948 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	AGRP	O00253	132 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	FTL	P02792	175 aa	Predicted RBP	11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	ZNF30	P17039	623 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	ATF4	P18848	351 aa	Predicted RBP	11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	CSF2RB	P32927	897 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	ARL4A	P40617	200 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	ACTR1B	P42025	376 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	POLD2	P49005	469 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	CDH6	P55285	790 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	ACTR1A	P61163	376 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	MC2R	Q01718	297 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	PTS	Q03393	145 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	TLE1	Q04724	770 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	TRAF2	Q12933	501 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	KCNAB2	Q13303	367 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	BIRC2	Q13490	618 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	DCAF12	Q5T6F0	453 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	ARMC12	Q5T9G4	340 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	MARC1	Q5VT66	337 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	NKAIN2	Q5VXU1	208 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	RAET1G	Q6H3X3	334 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	TMCO3	Q6UWJ1	677 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	ARHGAP22	Q7Z5H3	698 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	TMEM139	Q8IV31	216 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	CACNA2D3	Q8IZS8	1091 aa		11.47	□□□□□ -0.57

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