RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 PDPK2PQ6A1A2 396 aa16.54■□□□□ 0.24
PKP3-209ENST00000533069 PID1Q7Z2X4 250 aa16.54■□□□□ 0.24
PKP3-209ENST00000533069 GALNT13Q8IUC8 556 aa16.54■□□□□ 0.24
PKP3-209ENST00000533069 ZNF592Q92610 1267 aa16.54■□□□□ 0.24
PKP3-209ENST00000533069 NAP1L3Q99457 506 aaPredicted RBP16.54■□□□□ 0.24
PKP3-209ENST00000533069 GPR63Q9BZJ6 419 aa16.54■□□□□ 0.24
PKP3-209ENST00000533069 SUDS3Q9H7L9 328 aaPredicted RBP16.54■□□□□ 0.24
PKP3-209ENST00000533069 APPL1Q9UKG1 709 aa16.54■□□□□ 0.24
PKP3-209ENST00000533069 RAXQ9Y2V3 346 aa16.54■□□□□ 0.24
PKP3-209ENST00000533069 LRP4O75096 1905 aa16.54■□□□□ 0.24
PKP3-209ENST00000533069 LOC285095A0A1B0GVY8 99 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 NTN3O00634 580 aaPredicted RBP16.53■□□□□ 0.24
PKP3-209ENST00000533069 INPP4BO15327 924 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 NUDT21O43809 227 aaKnown RBP16.53■□□□□ 0.24
PKP3-209ENST00000533069 USP12O75317 370 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 STK10O94804 968 aaKnown RBP16.53■□□□□ 0.24
PKP3-209ENST00000533069 ATP1A1P05023 1023 aaKnown RBP16.53■□□□□ 0.24
PKP3-209ENST00000533069 WNT3AP56704 352 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 CTBSQ01459 385 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 MPP3Q13368 585 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 HLTFQ14527 1009 aaKnown RBP eCLIP16.53■□□□□ 0.24
PKP3-209ENST00000533069 FAM182AQ5T1J6 154 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 ITPRIPL1Q6GPH6 555 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 KDELC1Q6UW63 502 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 TMC3Q7Z5M5 1100 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 TRIM74Q86UV6 250 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 NRROSQ86YC3 692 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 LSMEM2Q8N112 164 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 ACTL9Q8TC94 416 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 PTCD2Q8WV60 388 aaKnown RBP16.53■□□□□ 0.24
PKP3-209ENST00000533069 ALG3Q92685 438 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 EID2BQ96D98 161 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 ZSCAN5AQ9BUG6 496 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 TRABDQ9H4I3 376 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 RMI1Q9H9A7 625 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 UBP1Q9NZI7 540 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 TAAR2Q9P1P5 351 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 RSPH14Q9UHP6 348 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 SHOC2Q9UQ13 582 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 TMEM98Q9Y2Y6 226 aa16.53■□□□□ 0.24
PKP3-209ENST00000533069 TMX2-CTNND1H3BSU7 103 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 BRINP1O60477 761 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 ASMTLO95671 621 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 PIRTP0C851 137 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 PYGMP11217 842 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 HLA-DPA1P20036 260 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 RBL1P28749 1068 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 ACTN2P35609 894 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 OTUD4Q01804 1114 aaKnown RBP16.52■□□□□ 0.24
PKP3-209ENST00000533069 PYCR3Q53H96 274 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 SEL1L2Q5TEA6 688 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 SLC30A9Q6PML9 568 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 C17orf82Q86X59 251 aaPredicted RBP16.52■□□□□ 0.24
PKP3-209ENST00000533069 TRAM1L1Q8N609 369 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 ZDHHC1Q8WTX9 485 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 MAIP1Q8WWC4 291 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 OXNAD1Q96HP4 312 aaPredicted RBP16.52■□□□□ 0.24
PKP3-209ENST00000533069 GFM1Q96RP9 751 aaKnown RBP16.52■□□□□ 0.24
PKP3-209ENST00000533069 OSBPL9Q96SU4 736 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 HERPUD2Q9BSE4 406 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 SPATA16Q9BXB7 569 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 GBA3Q9H227 469 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 SYNDIG1Q9H7V2 258 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 POLR1BQ9H9Y6 1135 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 SPATS2LQ9NUQ6 558 aaKnown RBP16.52■□□□□ 0.24
PKP3-209ENST00000533069 HACD3Q9P035 362 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 RABGEF1Q9UJ41 708 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 CNOT6Q9ULM6 557 aaKnown RBP16.52■□□□□ 0.24
PKP3-209ENST00000533069 TTC7AQ9ULT0 858 aaPredicted RBP16.52■□□□□ 0.24
PKP3-209ENST00000533069 GPSM3Q9Y4H4 160 aa16.52■□□□□ 0.24
PKP3-209ENST00000533069 ANKRD11Q6UB99 2663 aaPredicted RBP16.52■□□□□ 0.23
PKP3-209ENST00000533069 TDRD6O60522 2096 aaKnown RBP16.51■□□□□ 0.23
PKP3-209ENST00000533069 A0A087WV48 116 aa16.51■□□□□ 0.23
PKP3-209ENST00000533069 FADS2P1A8MWK0 482 aa16.51■□□□□ 0.23
PKP3-209ENST00000533069 GPR89AB7ZAQ6 455 aa16.51■□□□□ 0.23
PKP3-209ENST00000533069 DDX3YO15523 660 aaKnown RBP16.51■□□□□ 0.23
PKP3-209ENST00000533069 ZW10O43264 779 aa16.51■□□□□ 0.23
PKP3-209ENST00000533069 ANXA9O76027 345 aa16.51■□□□□ 0.23
PKP3-209ENST00000533069 DXOO77932 396 aaKnown RBP16.51■□□□□ 0.23
PKP3-209ENST00000533069 SLC4A1P02730 911 aa16.51■□□□□ 0.23
PKP3-209ENST00000533069 FGF1P05230 155 aa16.51■□□□□ 0.23
PKP3-209ENST00000533069 RPLP0P05388 317 aaKnown RBP16.51■□□□□ 0.23
PKP3-209ENST00000533069 GPR89BP0CG08 455 aa16.51■□□□□ 0.23
PKP3-209ENST00000533069 RBP3P10745 1247 aa16.51■□□□□ 0.23
PKP3-209ENST00000533069 AK4P27144 223 aaPredicted RBP16.51■□□□□ 0.23
PKP3-209ENST00000533069 HMGCLP35914 325 aa16.51■□□□□ 0.23
PKP3-209ENST00000533069 ACTR1BP42025 376 aa16.51■□□□□ 0.23
PKP3-209ENST00000533069 LSSP48449 732 aa16.51■□□□□ 0.23
PKP3-209ENST00000533069 EIF3EP60228 445 aaKnown RBP16.51■□□□□ 0.23
PKP3-209ENST00000533069 ACTR1AP61163 376 aa16.51■□□□□ 0.23
PKP3-209ENST00000533069 GABREP78334 506 aa16.51■□□□□ 0.23
PKP3-209ENST00000533069 CKAP4Q07065 602 aaKnown RBP16.51■□□□□ 0.23
PKP3-209ENST00000533069 WHAMMP3Q1A5X7 153 aa16.51■□□□□ 0.23
PKP3-209ENST00000533069 MARK2Q7KZI7 788 aaKnown RBP16.51■□□□□ 0.23
PKP3-209ENST00000533069 CCNJLQ8IV13 435 aa16.51■□□□□ 0.23
PKP3-209ENST00000533069 GPR26Q8NDV2 337 aa16.51■□□□□ 0.23
PKP3-209ENST00000533069 SNIP1Q8TAD8 396 aaKnown RBP16.51■□□□□ 0.23
PKP3-209ENST00000533069 MRGPRX2Q96LB1 330 aa16.51■□□□□ 0.23
PKP3-209ENST00000533069 PPP1R2P1Q96PQ5 205 aa16.51■□□□□ 0.23
PKP3-209ENST00000533069 PLEKHG4BQ96PX9 1271 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms