RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 HERC2P3Q9BVR0 1158 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 EPHX3Q9H6B9 360 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 UBE2ZQ9H832 354 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-213ENST00000530784 G6PC2Q9NQR9 355 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 ZNF215Q9UL58 517 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-213ENST00000530784 INSL5Q9Y5Q6 135 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 FRMPD4Q14CM0 1322 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 CYTH3O43739 400 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 FCGR2AP12318 317 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 KCNA5P22460 613 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 ICAM3P32942 547 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 TROAPQ12815 778 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 CUL4BQ13620 913 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 TMEM31Q5JXX7 168 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 METTL7BQ6UX53 244 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 FAM185AQ8N0U4 392 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 DPP10Q8N608 796 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 LRRC57Q8N9N7 239 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 ENGASEQ8NFI3 743 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 NCOA7Q8NI08 942 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 OIT3Q8WWZ8 545 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 PIBF1Q8WXW3 757 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 APBB2Q92870 758 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 MRPL38Q96DV4 380 aaKnown RBP7.28□□□□□ -1.24
CSDE1-213ENST00000530784 URB1-AS1Q96HZ7 61 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 YME1L1Q96TA2 773 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 ARPC5LQ9BPX5 153 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 B3GNT4Q9C0J1 378 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 HIPK2Q9H2X6 1198 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 ZDHHC7Q9NXF8 308 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 PTPRSQ13332 1948 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 TTC28Q96AY4 2481 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 COL4A6Q14031 1691 aa7.28□□□□□ -1.24
CSDE1-213ENST00000530784 KIAA1217Q5T5P2 1943 aa7.27□□□□□ -1.25
CSDE1-213ENST00000530784 TRANK1O15050 2925 aa7.27□□□□□ -1.25
CSDE1-213ENST00000530784 E7EWF7 191 aa7.27□□□□□ -1.25
CSDE1-213ENST00000530784 SYN3O14994 580 aa7.27□□□□□ -1.25
CSDE1-213ENST00000530784 HOXA11P31270 313 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-213ENST00000530784 KIF5BP33176 963 aa7.27□□□□□ -1.25
CSDE1-213ENST00000530784 TRAPPC10P48553 1259 aa7.27□□□□□ -1.25
CSDE1-213ENST00000530784 RASSF2P50749 326 aa7.27□□□□□ -1.25
CSDE1-213ENST00000530784 SP4Q02446 784 aa7.27□□□□□ -1.25
CSDE1-213ENST00000530784 POSTNQ15063 836 aa7.27□□□□□ -1.25
CSDE1-213ENST00000530784 EPC2Q52LR7 807 aa7.27□□□□□ -1.25
CSDE1-213ENST00000530784 Q6ZTK2 550 aa7.27□□□□□ -1.25
CSDE1-213ENST00000530784 CTCFLQ8NI51 663 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-213ENST00000530784 TOP1MTQ969P6 601 aa7.27□□□□□ -1.25
CSDE1-213ENST00000530784 RRP36Q96EU6 259 aaKnown RBP7.27□□□□□ -1.25
CSDE1-213ENST00000530784 POLDIP3Q9BY77 421 aaKnown RBP7.27□□□□□ -1.25
CSDE1-213ENST00000530784 IFIH1Q9BYX4 1025 aaKnown RBP7.27□□□□□ -1.25
CSDE1-213ENST00000530784 MYLK2Q9H1R3 596 aa7.27□□□□□ -1.25
CSDE1-213ENST00000530784 RMI1Q9H9A7 625 aa7.27□□□□□ -1.25
CSDE1-213ENST00000530784 SETD4Q9NVD3 440 aa7.27□□□□□ -1.25
CSDE1-213ENST00000530784 SEC63Q9UGP8 760 aaKnown RBP7.27□□□□□ -1.25
CSDE1-213ENST00000530784 REV3LO60673 3130 aa7.27□□□□□ -1.25
CSDE1-213ENST00000530784 NRCAMQ92823 1304 aa7.27□□□□□ -1.25
CSDE1-213ENST00000530784 CSF1P09603 554 aa7.26□□□□□ -1.25
CSDE1-213ENST00000530784 CYP4B1P13584 511 aa7.26□□□□□ -1.25
CSDE1-213ENST00000530784 CHMLP26374 656 aa7.26□□□□□ -1.25
CSDE1-213ENST00000530784 RFX2P48378 723 aa7.26□□□□□ -1.25
CSDE1-213ENST00000530784 TMPRSS3P57727 454 aa7.26□□□□□ -1.25
CSDE1-213ENST00000530784 GPM6BQ13491 265 aa7.26□□□□□ -1.25
CSDE1-213ENST00000530784 PKP1Q13835 747 aa7.26□□□□□ -1.25
CSDE1-213ENST00000530784 RUSC1-AS1Q66K80 236 aa7.26□□□□□ -1.25
CSDE1-213ENST00000530784 MEPCEQ7L2J0 689 aaKnown RBP7.26□□□□□ -1.25
CSDE1-213ENST00000530784 GALNT7Q86SF2 657 aa7.26□□□□□ -1.25
CSDE1-213ENST00000530784 CAMK1DQ8IU85 385 aa7.26□□□□□ -1.25
CSDE1-213ENST00000530784 MB21D2Q8IYB1 491 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-213ENST00000530784 GALNT15Q8N3T1 639 aa7.26□□□□□ -1.25
CSDE1-213ENST00000530784 GABPB2Q8TAK5 448 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-213ENST00000530784 KTI12Q96EK9 354 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-213ENST00000530784 CDHR1Q96JP9 859 aa7.26□□□□□ -1.25
CSDE1-213ENST00000530784 SPZ1Q9BXG8 430 aa7.26□□□□□ -1.25
CSDE1-213ENST00000530784 SAYSD1Q9NPB0 183 aa7.26□□□□□ -1.25
CSDE1-213ENST00000530784 THAP1Q9NVV9 213 aa7.26□□□□□ -1.25
CSDE1-213ENST00000530784 PLEKHB1Q9UF11 243 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-213ENST00000530784 SIP14410 1827 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 BECN2A8MW95 431 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 PI4K2BG5E9Z4 385 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 H3BQ06 376 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-213ENST00000530784 IFRD1O00458 451 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-213ENST00000530784 TCEA3O75764 348 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 FAM155BO75949 473 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 CYP1A2P05177 515 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 GHRP10912 638 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 IL9P15248 144 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 ARSAP15289 507 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 CTNNB1P35222 781 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 TCF7P36402 384 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-213ENST00000530784 GNAQP50148 359 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 RPS6KA3P51812 740 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 SELENOVP59797 346 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 PPFIA1Q13136 1202 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 ERV3-1Q14264 604 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 GRAMD1BQ3KR37 738 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 TCEAL5Q5H9L2 206 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 CASC1Q6TDU7 716 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 BRSK2Q8IWQ3 736 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 NEK9Q8TD19 979 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 ADAMTS15Q8TE58 950 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms