RNA–Protein interactions for RNA: ENST00000529993.5

LRP5-206, Transcript of LDL receptor related protein 5, humanhuman

TSL 1 (best)

Gene LRP5, Length 5,103 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP5-206ENST00000529993 ACTR3P61158 418 aa14.9□□□□□ -0.02
LRP5-206ENST00000529993 KLHL28Q9NXS3 571 aa14.9□□□□□ -0.02
LRP5-206ENST00000529993 SEPT4O43236 478 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 SLC7A4O43246 635 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 CDH5P33151 784 aaPredicted RBP14.89□□□□□ -0.03
LRP5-206ENST00000529993 NDST2P52849 883 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 SLC18A2Q05940 514 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 SIX1Q15475 284 aaPredicted RBP14.89□□□□□ -0.03
LRP5-206ENST00000529993 LIN52Q52LA3 116 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 PLEKHM3Q6ZWE6 761 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 CAND1Q86VP6 1230 aaKnown RBP14.89□□□□□ -0.03
LRP5-206ENST00000529993 ATL1Q8WXF7 558 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 MRPS23Q9Y3D9 190 aaKnown RBP14.89□□□□□ -0.03
LRP5-206ENST00000529993 STX16-NPEPL1H3BU86 382 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 SELPP16109 830 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 GNPDA1P46926 289 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 USP46P62068 366 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 SERPINA13PQ6UXR4 307 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 C15orf39Q6ZRI6 1047 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 ZDHHC14Q8IZN3 488 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 ZNF540Q8NDQ6 660 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 RPL10LQ96L21 214 aaKnown RBP14.89□□□□□ -0.03
LRP5-206ENST00000529993 OXSMQ9NWU1 459 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 CCDC162PA2VCL2 907 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 EDIL3O43854 480 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 TYROBPO43914 113 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 AHSGP02765 367 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 HTR7P34969 479 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 EPS8Q12929 822 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 TRIP4Q15650 581 aaPredicted RBP14.89□□□□□ -0.03
LRP5-206ENST00000529993 ATXN7L2Q5T6C5 722 aaPredicted RBP14.89□□□□□ -0.03
LRP5-206ENST00000529993 PHTF2Q8N3S3 785 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 STARD8Q92502 1023 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 SMOQ99835 787 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 J3KR12 359 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 CAPN1P07384 714 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 ALOX12P18054 663 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 IL10RBQ08334 325 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 TRIM25Q14258 630 aaKnown RBP14.89□□□□□ -0.03
LRP5-206ENST00000529993 PHKG1Q16816 387 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 NELL1Q92832 810 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 COL26A1Q96A83 441 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 TADA1Q96BN2 335 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 DGCR14Q96DF8 476 aaKnown RBP14.89□□□□□ -0.03
LRP5-206ENST00000529993 PLEKHG4BQ96PX9 1271 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 AP3M1Q9Y2T2 418 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 KCNE2Q9Y6J6 123 aa14.89□□□□□ -0.03
LRP5-206ENST00000529993 NAA20P61599 178 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 CYP4F2P78329 520 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 CYP4F3Q08477 520 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 DGKKQ5KSL6 1271 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 SPATA19Q7Z5L4 167 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 TBC1D21Q8IYX1 336 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 OR7A2PQ8NGA2 310 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 BRSK1Q8TDC3 778 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 LRTM1Q9HBL6 345 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 CD84Q9UIB8 345 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 RPS6KA6Q9UK32 745 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 PPM1HQ9ULR3 514 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 A0A1B0GVM2 712 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 TCAF2A6NFQ2 919 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 STK16O75716 305 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 DGUOKQ16854 277 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 DEFB115Q30KQ5 88 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 ZNF697Q5TEC3 545 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 CRTC3Q6UUV7 619 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 RPS27LQ71UM5 84 aaKnown RBP14.88□□□□□ -0.03
LRP5-206ENST00000529993 MAGEH1Q9H213 219 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 PHRF1Q9P1Y6 1649 aaKnown RBP14.88□□□□□ -0.03
LRP5-206ENST00000529993 LIN7AO14910 233 aaPredicted RBP14.88□□□□□ -0.03
LRP5-206ENST00000529993 PABPC1P11940 636 aaKnown RBP14.88□□□□□ -0.03
LRP5-206ENST00000529993 PRKCZQ05513 592 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 NAPRTQ6XQN6 538 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 AADATQ8N5Z0 425 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 ARL14EPQ8N8R7 260 aaPredicted RBP14.88□□□□□ -0.03
LRP5-206ENST00000529993 HAPLN3Q96S86 360 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 STRA6Q9BX79 667 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 EBF2Q9HAK2 575 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 KIAA1522Q9P206 1035 aaPredicted RBP14.88□□□□□ -0.03
LRP5-206ENST00000529993 MAGEL2Q9UJ55 1249 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 COPG1Q9Y678 874 aaKnown RBP14.88□□□□□ -0.03
LRP5-206ENST00000529993 SETD1AO15047 1707 aaKnown RBP14.88□□□□□ -0.03
LRP5-206ENST00000529993 CXCL14O95715 111 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 FTH1P02794 183 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 THOP1P52888 689 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 PRKCQQ04759 706 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 TRAF3Q13114 568 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 PERM1Q5SV97 790 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 TRAF7Q6Q0C0 670 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 CDHR3Q6ZTQ4 885 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 FRMD7Q6ZUT3 714 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 C2orf73Q8N5S3 287 aaPredicted RBP14.88□□□□□ -0.03
LRP5-206ENST00000529993 SLC47A1Q96FL8 570 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 CCDC3Q9BQI4 270 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 REXO4Q9GZR2 422 aaKnown RBP14.88□□□□□ -0.03
LRP5-206ENST00000529993 GKN1Q9NS71 199 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 ATAD3AQ9NVI7 634 aa14.88□□□□□ -0.03
LRP5-206ENST00000529993 NPHS1O60500 1241 aa14.87□□□□□ -0.03
LRP5-206ENST00000529993 PRKCHP24723 683 aa14.87□□□□□ -0.03
LRP5-206ENST00000529993 PRDX6P30041 224 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms