RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 CLPBQ9H078 707 aa17.13■□□□□ 0.33
LMX1B-203ENST00000526117 TCEAL2Q9H3H9 227 aaPredicted RBP17.13■□□□□ 0.33
LMX1B-203ENST00000526117 PCYOX1Q9UHG3 505 aa17.13■□□□□ 0.33
LMX1B-203ENST00000526117 PCDHGA1Q9Y5H4 931 aa17.13■□□□□ 0.33
LMX1B-203ENST00000526117 GLYATL1P3A0A0U1RQE8 302 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 MROH6A6NGR9 719 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 AGAP14A8MT82 685 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 TRIM38O00635 465 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 GIPC1O14908 333 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 LDOC1O95751 146 aaPredicted RBP17.12■□□□□ 0.33
LMX1B-203ENST00000526117 GAS8O95995 478 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 FUCA1P04066 466 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 APRTP07741 180 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 CDK4P11802 303 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 CTSEP14091 401 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 ILKQ13418 452 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 LRP8Q14114 963 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 C6orf132Q5T0Z8 1188 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 KCTD16Q68DU8 428 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 PRUNE1Q86TP1 453 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 GPBAR1Q8TDU6 330 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 LMX1AQ8TE12 382 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 BOCQ9BWV1 1114 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 TRIM39Q9HCM9 518 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 BPIFA1Q9NP55 256 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 TOR4AQ9NXH8 423 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 SMARCAL1Q9NZC9 954 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 SUFUQ9UMX1 484 aa17.12■□□□□ 0.33
LMX1B-203ENST00000526117 CCDC188H7C350 402 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 SIGLEC6O43699 453 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 VEGFDO43915 354 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 DNAJC6O75061 913 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 TRIM16O95361 564 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 KRT14P02533 472 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 SLC4A1P02730 911 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 ANXA6P08133 673 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 CKMT1AP12532 417 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 ACP1P24666 158 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 LMAN1P49257 510 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 PEX6Q13608 980 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 ATP13A5Q4VNC0 1218 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 ALS2CLQ60I27 953 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 OR4K2Q8NGD2 314 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 OR52K1Q8NGK4 314 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 STYXQ8WUJ0 223 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 SCG3Q8WXD2 468 aaKnown RBP17.11■□□□□ 0.33
LMX1B-203ENST00000526117 CNDP2Q96KP4 475 aaKnown RBP17.11■□□□□ 0.33
LMX1B-203ENST00000526117 CYP4F12Q9HCS2 524 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 MRPL40Q9NQ50 206 aaKnown RBP17.11■□□□□ 0.33
LMX1B-203ENST00000526117 EVA1BQ9NVM1 165 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 NLE1Q9NVX2 485 aaPredicted RBP17.11■□□□□ 0.33
LMX1B-203ENST00000526117 APOBEC2Q9Y235 224 aaKnown RBP17.11■□□□□ 0.33
LMX1B-203ENST00000526117 OAS3Q9Y6K5 1087 aaKnown RBP17.11■□□□□ 0.33
LMX1B-203ENST00000526117 PCNX2A6NKB5 2137 aa17.11■□□□□ 0.33
LMX1B-203ENST00000526117 HEATR9A2RTY3 570 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 CHUKO15111 745 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 INPP4BO15327 924 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 YY2O15391 372 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 NUAK1O60285 661 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 SLC25A14O95258 325 aaPredicted RBP17.1■□□□□ 0.33
LMX1B-203ENST00000526117 ECEL1O95672 775 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 CKMT2P17540 419 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 PAFAH1B1P43034 410 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 BASP1P80723 227 aaKnown RBP17.1■□□□□ 0.33
LMX1B-203ENST00000526117 SIM1P81133 766 aaPredicted RBP17.1■□□□□ 0.33
LMX1B-203ENST00000526117 XIAPP98170 497 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 FOXK2Q01167 660 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 ACVR1Q04771 509 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 KCNJ11Q14654 390 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 PYCR3Q53H96 274 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 LDLRAP1Q5SW96 308 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 PPP1R21Q6ZMI0 780 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 SYDE1Q6ZW31 735 aaPredicted RBP17.1■□□□□ 0.33
LMX1B-203ENST00000526117 NLRP9Q7RTR0 991 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 C17orf53Q8N3J3 647 aaPredicted RBP17.1■□□□□ 0.33
LMX1B-203ENST00000526117 DNAAF3Q8N9W5 541 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 DDHD1Q8NEL9 900 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 GSDMCQ9BYG8 508 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 CARS2Q9HA77 564 aaKnown RBP17.1■□□□□ 0.33
LMX1B-203ENST00000526117 TMPRSS11EQ9UL52 423 aa17.1■□□□□ 0.33
LMX1B-203ENST00000526117 LY6G6EA0A0G2JKS1 128 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 SRP72O76094 671 aaKnown RBP17.09■□□□□ 0.33
LMX1B-203ENST00000526117 PRAMEF1O95521 474 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 TUBB4AP04350 444 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 GP1BAP07359 652 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 ADRB1P08588 477 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 ADRA1DP25100 572 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 CASQ1P31415 396 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 ADCY8P40145 1251 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 POLD2P49005 469 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 ACADVLP49748 655 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 DUSP3P51452 185 aaPredicted RBP17.09■□□□□ 0.33
LMX1B-203ENST00000526117 CLCNKAP51800 687 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 ILF3Q12906 894 aaKnown RBP eCLIP17.09■□□□□ 0.33
LMX1B-203ENST00000526117 GPS1Q13098 491 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 NFATC2Q13469 925 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 CHRNA6Q15825 494 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 GPR33Q49SQ1 333 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 LRRC8BQ6P9F7 803 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 OGFOD3Q6PK18 319 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms