RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 TRAM1L1Q8N609 369 aa17.39■□□□□ 0.37
NR1H3-228ENST00000525441 ZDHHC1Q8WTX9 485 aa17.39■□□□□ 0.37
NR1H3-228ENST00000525441 PTCD2Q8WV60 388 aaKnown RBP17.39■□□□□ 0.37
NR1H3-228ENST00000525441 EID2BQ96D98 161 aa17.39■□□□□ 0.37
NR1H3-228ENST00000525441 HES6Q96HZ4 224 aa17.39■□□□□ 0.37
NR1H3-228ENST00000525441 SYNDIG1Q9H7V2 258 aa17.39■□□□□ 0.37
NR1H3-228ENST00000525441 C10orf88Q9H8K7 445 aa17.39■□□□□ 0.37
NR1H3-228ENST00000525441 RMI1Q9H9A7 625 aa17.39■□□□□ 0.37
NR1H3-228ENST00000525441 CNOT6Q9ULM6 557 aaKnown RBP17.39■□□□□ 0.37
NR1H3-228ENST00000525441 GUCA1BQ9UMX6 200 aa17.39■□□□□ 0.37
NR1H3-228ENST00000525441 AAR2Q9Y312 384 aaKnown RBP17.39■□□□□ 0.37
NR1H3-228ENST00000525441 CAPN6Q9Y6Q1 641 aa17.39■□□□□ 0.37
NR1H3-228ENST00000525441 RP1P56715 2156 aa17.39■□□□□ 0.37
NR1H3-228ENST00000525441 KMT2BQ9UMN6 2715 aaPredicted RBP17.39■□□□□ 0.37
NR1H3-228ENST00000525441 FADS2P1A8MWK0 482 aa17.38■□□□□ 0.37
NR1H3-228ENST00000525441 TAF4O00268 1085 aa17.38■□□□□ 0.37
NR1H3-228ENST00000525441 PNLIPP16233 465 aa17.38■□□□□ 0.37
NR1H3-228ENST00000525441 AK4P27144 223 aaPredicted RBP17.38■□□□□ 0.37
NR1H3-228ENST00000525441 ACTR1BP42025 376 aa17.38■□□□□ 0.37
NR1H3-228ENST00000525441 ACTR1AP61163 376 aa17.38■□□□□ 0.37
NR1H3-228ENST00000525441 BIRC2Q13490 618 aa17.38■□□□□ 0.37
NR1H3-228ENST00000525441 HLTFQ14527 1009 aaKnown RBP eCLIP17.38■□□□□ 0.37
NR1H3-228ENST00000525441 SLC1A5Q15758 541 aa17.38■□□□□ 0.37
NR1H3-228ENST00000525441 ANKRD20A2Q5SQ80 823 aa17.38■□□□□ 0.37
NR1H3-228ENST00000525441 ANKRD20A1Q5TYW2 823 aa17.38■□□□□ 0.37
NR1H3-228ENST00000525441 ANKRD20A3Q5VUR7 823 aa17.38■□□□□ 0.37
NR1H3-228ENST00000525441 SLC30A9Q6PML9 568 aa17.38■□□□□ 0.37
NR1H3-228ENST00000525441 NRROSQ86YC3 692 aa17.38■□□□□ 0.37
NR1H3-228ENST00000525441 GPR26Q8NDV2 337 aa17.38■□□□□ 0.37
NR1H3-228ENST00000525441 LRRC45Q96CN5 670 aa17.38■□□□□ 0.37
NR1H3-228ENST00000525441 SPATA13Q96N96 652 aa17.38■□□□□ 0.37
NR1H3-228ENST00000525441 FAM118BQ9BPY3 351 aa17.38■□□□□ 0.37
NR1H3-228ENST00000525441 SPATS2LQ9NUQ6 558 aaKnown RBP17.38■□□□□ 0.37
NR1H3-228ENST00000525441 ZNHIT2Q9UHR6 403 aa17.38■□□□□ 0.37
NR1H3-228ENST00000525441 SPO11Q9Y5K1 396 aa17.38■□□□□ 0.37
NR1H3-228ENST00000525441 ANKRD11Q6UB99 2663 aaPredicted RBP17.37■□□□□ 0.37
NR1H3-228ENST00000525441 MYLKQ15746 1914 aa17.37■□□□□ 0.37
NR1H3-228ENST00000525441 ZW10O43264 779 aa17.37■□□□□ 0.37
NR1H3-228ENST00000525441 NUDT21O43809 227 aaKnown RBP17.37■□□□□ 0.37
NR1H3-228ENST00000525441 USP12O75317 370 aa17.37■□□□□ 0.37
NR1H3-228ENST00000525441 SLC25A14O95258 325 aaPredicted RBP17.37■□□□□ 0.37
NR1H3-228ENST00000525441 ATP1A1P05023 1023 aaKnown RBP17.37■□□□□ 0.37
NR1H3-228ENST00000525441 CCDC175P0C221 793 aa17.37■□□□□ 0.37
NR1H3-228ENST00000525441 BPIP17213 487 aa17.37■□□□□ 0.37
NR1H3-228ENST00000525441 HMGCLP35914 325 aa17.37■□□□□ 0.37
NR1H3-228ENST00000525441 SEL1L2Q5TEA6 688 aa17.37■□□□□ 0.37
NR1H3-228ENST00000525441 CCNJLQ8IV13 435 aa17.37■□□□□ 0.37
NR1H3-228ENST00000525441 PLEKHG4BQ96PX9 1271 aa17.37■□□□□ 0.37
NR1H3-228ENST00000525441 GFM1Q96RP9 751 aaKnown RBP17.37■□□□□ 0.37
NR1H3-228ENST00000525441 FICDQ9BVA6 458 aa17.37■□□□□ 0.37
NR1H3-228ENST00000525441 CARD9Q9H257 536 aa17.37■□□□□ 0.37
NR1H3-228ENST00000525441 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.37■□□□□ 0.37
NR1H3-228ENST00000525441 LRIT1Q9P2V4 623 aa17.37■□□□□ 0.37
NR1H3-228ENST00000525441 APPL1Q9UKG1 709 aa17.37■□□□□ 0.37
NR1H3-228ENST00000525441 PCDHB1Q9Y5F3 818 aa17.37■□□□□ 0.37
NR1H3-228ENST00000525441 OAS3Q9Y6K5 1087 aaKnown RBP17.37■□□□□ 0.37
NR1H3-228ENST00000525441 GPR89AB7ZAQ6 455 aa17.36■□□□□ 0.37
NR1H3-228ENST00000525441 TMX2-CTNND1H3BSU7 103 aa17.36■□□□□ 0.37
NR1H3-228ENST00000525441 NTN3O00634 580 aaPredicted RBP17.36■□□□□ 0.37
NR1H3-228ENST00000525441 AURKAO14965 403 aa17.36■□□□□ 0.37
NR1H3-228ENST00000525441 DNAJC6O75061 913 aa17.36■□□□□ 0.37
NR1H3-228ENST00000525441 RPLP0P05388 317 aaKnown RBP17.36■□□□□ 0.37
NR1H3-228ENST00000525441 GPR89BP0CG08 455 aa17.36■□□□□ 0.37
NR1H3-228ENST00000525441 PSMB4P28070 264 aa17.36■□□□□ 0.37
NR1H3-228ENST00000525441 CHRNA4P43681 627 aa17.36■□□□□ 0.37
NR1H3-228ENST00000525441 GLT6D1Q7Z4J2 308 aa17.36■□□□□ 0.37
NR1H3-228ENST00000525441 PHYKPLQ8IUZ5 450 aa17.36■□□□□ 0.37
NR1H3-228ENST00000525441 LSMEM2Q8N112 164 aa17.36■□□□□ 0.37
NR1H3-228ENST00000525441 BLOC1S5Q8TDH9 187 aa17.36■□□□□ 0.37
NR1H3-228ENST00000525441 GLYATL1Q969I3 302 aa17.36■□□□□ 0.37
NR1H3-228ENST00000525441 ALS2CR12Q96Q35 445 aa17.36■□□□□ 0.37
NR1H3-228ENST00000525441 LRRN3Q9H3W5 708 aa17.36■□□□□ 0.37
NR1H3-228ENST00000525441 TRIM39Q9HCM9 518 aa17.36■□□□□ 0.37
NR1H3-228ENST00000525441 RABGEF1Q9UJ41 708 aa17.36■□□□□ 0.37
NR1H3-228ENST00000525441 RAXQ9Y2V3 346 aa17.36■□□□□ 0.37
NR1H3-228ENST00000525441 PKP3Q9Y446 797 aa17.36■□□□□ 0.37
NR1H3-228ENST00000525441 RNF215Q9Y6U7 377 aa17.36■□□□□ 0.37
NR1H3-228ENST00000525441 ARHGEF17Q96PE2 2063 aaPredicted RBP17.35■□□□□ 0.37
NR1H3-228ENST00000525441 C5orf60A6NFR6 353 aa17.35■□□□□ 0.37
NR1H3-228ENST00000525441 RHPN2P1A8MT19 583 aa17.35■□□□□ 0.37
NR1H3-228ENST00000525441 NUAK1O60285 661 aa17.35■□□□□ 0.37
NR1H3-228ENST00000525441 PPFIA2O75334 1257 aa17.35■□□□□ 0.37
NR1H3-228ENST00000525441 KRT37O76014 449 aa17.35■□□□□ 0.37
NR1H3-228ENST00000525441 ACTN2P35609 894 aa17.35■□□□□ 0.37
NR1H3-228ENST00000525441 LSSP48449 732 aa17.35■□□□□ 0.37
NR1H3-228ENST00000525441 CCL7P80098 99 aa17.35■□□□□ 0.37
NR1H3-228ENST00000525441 KLF1Q13351 362 aaPredicted RBP17.35■□□□□ 0.37
NR1H3-228ENST00000525441 ARHGEF18Q6ZSZ5 1173 aa17.35■□□□□ 0.37
NR1H3-228ENST00000525441 C17orf82Q86X59 251 aaPredicted RBP17.35■□□□□ 0.37
NR1H3-228ENST00000525441 LRRC8AQ8IWT6 810 aa17.35■□□□□ 0.37
NR1H3-228ENST00000525441 TTC30BQ8N4P2 665 aa17.35■□□□□ 0.37
NR1H3-228ENST00000525441 Q8N9G6 341 aaPredicted RBP17.35■□□□□ 0.37
NR1H3-228ENST00000525441 CCDC110Q8TBZ0 833 aa17.35■□□□□ 0.37
NR1H3-228ENST00000525441 POLR1BQ9H9Y6 1135 aa17.35■□□□□ 0.37
NR1H3-228ENST00000525441 BPIFA1Q9NP55 256 aa17.35■□□□□ 0.37
NR1H3-228ENST00000525441 PLEKHM1Q9Y4G2 1056 aa17.35■□□□□ 0.37
NR1H3-228ENST00000525441 URB1O60287 2271 aaKnown RBP17.35■□□□□ 0.37
NR1H3-228ENST00000525441 D6RAR5 112 aa17.34■□□□□ 0.37
NR1H3-228ENST00000525441 GRID2O43424 1007 aa17.34■□□□□ 0.37
NR1H3-228ENST00000525441 BRINP1O60477 761 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms