RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 HACD1B0YJ81 288 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 MTSS1O43312 755 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 NUDT21O43809 227 aaKnown RBP9.27□□□□□ -0.93
HDAC3-215ENST00000519474 PMPCBO75439 489 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 ASMTLO95671 621 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 EML2O95834 649 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 RPLP0P05388 317 aaKnown RBP9.27□□□□□ -0.93
HDAC3-215ENST00000519474 BPIP17213 487 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 NFKB1P19838 968 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 RBL1P28749 1068 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 ACTN2P35609 894 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 NAP1L1P55209 391 aaKnown RBP9.27□□□□□ -0.93
HDAC3-215ENST00000519474 MAZP56270 477 aaKnown RBP9.27□□□□□ -0.93
HDAC3-215ENST00000519474 WNT3AP56704 352 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 GABREP78334 506 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 ZFP36L1Q07352 338 aaKnown RBP9.27□□□□□ -0.93
HDAC3-215ENST00000519474 ILF3Q12906 894 aaKnown RBP eCLIP9.27□□□□□ -0.93
HDAC3-215ENST00000519474 SPIDRQ14159 915 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 NOMO1Q15155 1222 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 ZNF648Q5T619 568 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-215ENST00000519474 CCDC181Q5TID7 509 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 CCDC70Q6NSX1 233 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 SLC30A9Q6PML9 568 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 IGF2-ASQ6U949 168 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 ZNF574Q6ZN55 896 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-215ENST00000519474 MARK2Q7KZI7 788 aaKnown RBP9.27□□□□□ -0.93
HDAC3-215ENST00000519474 TMPRSS9Q7Z410 1059 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 B3GNT8Q7Z7M8 397 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 CCDC50Q8IVM0 306 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 LSMEM2Q8N112 164 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 SPC24Q8NBT2 197 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 SNIP1Q8TAD8 396 aaKnown RBP9.27□□□□□ -0.93
HDAC3-215ENST00000519474 HTR3CQ8WXA8 447 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 ALG3Q92685 438 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 HAUS1Q96CS2 278 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 CRELD1Q96HD1 420 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 OXNAD1Q96HP4 312 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-215ENST00000519474 MRGPRX2Q96LB1 330 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 ZNF578Q96N58 590 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-215ENST00000519474 DCBLD2Q96PD2 775 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 GFM1Q96RP9 751 aaKnown RBP9.27□□□□□ -0.93
HDAC3-215ENST00000519474 VAT1Q99536 393 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 GPR63Q9BZJ6 419 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 TRIM39Q9HCM9 518 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 ASCL3Q9NQ33 180 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 PKD2L2Q9NZM6 624 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 ATXN10Q9UBB4 475 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 TRIM10Q9UDY6 481 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 FAM153AQ9UHL3 310 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 TMPRSS11EQ9UL52 423 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 ATXN7L1Q9ULK2 861 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-215ENST00000519474 SATB2Q9UPW6 733 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 PRKAB1Q9Y478 270 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 SPO11Q9Y5K1 396 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 CCDC66A2RUB6 948 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 B4DGG1 531 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 H7C0C1 242 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 APOC4-APOC2K7ER74 178 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 DDX3YO15523 660 aaKnown RBP9.26□□□□□ -0.93
HDAC3-215ENST00000519474 KIF1CO43896 1103 aaKnown RBP9.26□□□□□ -0.93
HDAC3-215ENST00000519474 NUAK1O60285 661 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 SLC25A14O95258 325 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-215ENST00000519474 AGTP01019 485 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 APOC2P02655 101 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 ZNF8P17098 575 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-215ENST00000519474 CD1CP29017 333 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 ALDH4A1P30038 563 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 CDC25BP30305 580 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 CHRNA4P43681 627 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 ATP5OP48047 213 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 RWDD2BP57060 319 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 OR1D5P58170 312 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 ERVPABLB-1P60509 514 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 OTUD4Q01804 1114 aaKnown RBP9.26□□□□□ -0.93
HDAC3-215ENST00000519474 FOXD4Q12950 439 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-215ENST00000519474 MSLNQ13421 630 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-215ENST00000519474 SQSTM1Q13501 440 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 NR1D2Q14995 579 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 SIRPB2Q5JXA9 342 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 RANBP10Q6VN20 620 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 USP53Q70EK8 1073 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 CHST15Q7LFX5 561 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-215ENST00000519474 ZNF438Q7Z4V0 828 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 SPRED1Q7Z699 444 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 CCNJLQ8IV13 435 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 TTC30BQ8N4P2 665 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 SLC25A41Q8N5S1 370 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 ACTL9Q8TC94 416 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 OR2M4Q96R27 311 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 GORASP1Q9BQQ3 440 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 SPATA16Q9BXB7 569 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 OSBPL8Q9BZF1 889 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 BPIFA1Q9NP55 256 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 ARFGAP3Q9NP61 516 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 VPS18Q9P253 973 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 TRHDEQ9UKU6 1024 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 AMFRQ9UKV5 643 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 ZNF711Q9Y462 761 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 PCDHGA8Q9Y5G5 932 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 KIF26BQ2KJY2 2108 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms