RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 MECRQ9BV79 373 aa6.79□□□□□ -1.32
USP53-206ENST00000510737 SMC4Q9NTJ3 1288 aa6.79□□□□□ -1.32
USP53-206ENST00000510737 GREB1LQ9C091 1923 aaPredicted RBP6.79□□□□□ -1.32
USP53-206ENST00000510737 B4DLN1 442 aa6.78□□□□□ -1.32
USP53-206ENST00000510737 KRT10P13645 584 aa6.78□□□□□ -1.32
USP53-206ENST00000510737 TNFSF4P23510 183 aa6.78□□□□□ -1.32
USP53-206ENST00000510737 GRK5P34947 590 aa6.78□□□□□ -1.32
USP53-206ENST00000510737 MRPL12P52815 198 aaKnown RBP6.78□□□□□ -1.32
USP53-206ENST00000510737 EEF1A2Q05639 463 aaKnown RBP6.78□□□□□ -1.32
USP53-206ENST00000510737 PKP1Q13835 747 aa6.78□□□□□ -1.32
USP53-206ENST00000510737 STXBP2Q15833 593 aa6.78□□□□□ -1.32
USP53-206ENST00000510737 FBXO47Q5MNV8 452 aa6.78□□□□□ -1.32
USP53-206ENST00000510737 XRRA1Q6P2D8 792 aa6.78□□□□□ -1.32
USP53-206ENST00000510737 TSSK4Q6SA08 328 aa6.78□□□□□ -1.32
USP53-206ENST00000510737 NEXN-AS1Q8NBZ9 246 aa6.78□□□□□ -1.32
USP53-206ENST00000510737 MRPS27Q92552 414 aaKnown RBP6.78□□□□□ -1.32
USP53-206ENST00000510737 API5Q9BZZ5 524 aaKnown RBP6.78□□□□□ -1.32
USP53-206ENST00000510737 CWH43Q9H720 699 aa6.78□□□□□ -1.32
USP53-206ENST00000510737 CATSPERBQ9H7T0 1116 aa6.78□□□□□ -1.32
USP53-206ENST00000510737 NECTIN3Q9NQS3 549 aa6.78□□□□□ -1.32
USP53-206ENST00000510737 IGSF9Q9P2J2 1179 aa6.78□□□□□ -1.32
USP53-206ENST00000510737 COPG1Q9Y678 874 aaKnown RBP6.78□□□□□ -1.32
USP53-206ENST00000510737 IGF2RP11717 2491 aa6.78□□□□□ -1.32
USP53-206ENST00000510737 LAMA5O15230 3695 aa6.78□□□□□ -1.32
USP53-206ENST00000510737 PLXNA4Q9HCM2 1894 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 ITPR1Q14643 2758 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 HELZ2Q9BYK8 2649 aaKnown RBP6.77□□□□□ -1.33
USP53-206ENST00000510737 LIASO43766 372 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 LDB3O75112 727 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 N4BP1O75113 896 aaKnown RBP6.77□□□□□ -1.33
USP53-206ENST00000510737 EIF3JO75822 258 aaKnown RBP6.77□□□□□ -1.33
USP53-206ENST00000510737 PRSS2P07478 247 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 FCGR1AP12314 374 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 CD52P31358 61 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 TMPRSS3P57727 454 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 TFAP4Q01664 338 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 LPAL2Q16609 132 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 COBLL1Q53SF7 1204 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 CELF3Q5SZQ8 465 aaKnown RBP6.77□□□□□ -1.33
USP53-206ENST00000510737 SPOUT1Q5T280 376 aaKnown RBP6.77□□□□□ -1.33
USP53-206ENST00000510737 ERAP2Q6P179 960 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 AAGABQ6PD74 315 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 FBXO38Q6PIJ6 1188 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 SPSB3Q6PJ21 355 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 KLBQ86Z14 1044 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 THNSL1Q8IYQ7 743 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 LRRC57Q8N9N7 239 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 COLGALT1Q8NBJ5 622 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 PJA1Q8NG27 643 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 REXO5Q96IC2 774 aaKnown RBP6.77□□□□□ -1.33
USP53-206ENST00000510737 SPATA33Q96N06 139 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 ENTPD7Q9NQZ7 604 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 ERRFI1Q9UJM3 462 aaPredicted RBP6.77□□□□□ -1.33
USP53-206ENST00000510737 LZTS1Q9Y250 596 aa6.77□□□□□ -1.33
USP53-206ENST00000510737 MTF2Q9Y483 593 aaPredicted RBP6.77□□□□□ -1.33
USP53-206ENST00000510737 KIAA1671Q9BY89 1806 aa6.76□□□□□ -1.33
USP53-206ENST00000510737 STMND1H3BQB6 276 aa6.76□□□□□ -1.33
USP53-206ENST00000510737 STAG3L1P0CL83 205 aa6.76□□□□□ -1.33
USP53-206ENST00000510737 EPCAMP16422 314 aa6.76□□□□□ -1.33
USP53-206ENST00000510737 RARSP54136 660 aaKnown RBP6.76□□□□□ -1.33
USP53-206ENST00000510737 STARD6P59095 220 aa6.76□□□□□ -1.33
USP53-206ENST00000510737 C8orf82Q6P1X6 216 aaPredicted RBP6.76□□□□□ -1.33
USP53-206ENST00000510737 DCLRE1AQ6PJP8 1040 aa6.76□□□□□ -1.33
USP53-206ENST00000510737 AACSQ86V21 672 aa6.76□□□□□ -1.33
USP53-206ENST00000510737 ZNF566Q969W8 418 aa6.76□□□□□ -1.33
USP53-206ENST00000510737 IWS1Q96ST2 819 aa6.76□□□□□ -1.33
USP53-206ENST00000510737 GMEB2Q9UKD1 530 aa6.76□□□□□ -1.33
USP53-206ENST00000510737 RAI2Q9Y5P3 530 aa6.76□□□□□ -1.33
USP53-206ENST00000510737 MYH8P13535 1937 aa6.76□□□□□ -1.33
USP53-206ENST00000510737 BAZ2AQ9UIF9 1905 aaKnown RBP6.76□□□□□ -1.33
USP53-206ENST00000510737 TCRBV7S3A2A0A539 114 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 NTN3O00634 580 aaPredicted RBP6.75□□□□□ -1.33
USP53-206ENST00000510737 PMM2O15305 246 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 NMT2O60551 498 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 CXCL14O95715 111 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 GGPS1O95749 300 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 LGALS2P05162 132 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 TSPY3P0CV98 308 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 TSPY8P0CW00 308 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 SCG2P13521 617 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 KLRC2P26717 231 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 DSC1Q08554 894 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 GRSF1Q12849 480 aaKnown RBP eCLIP6.75□□□□□ -1.33
USP53-206ENST00000510737 TDRD12Q587J7 1177 aaKnown RBP6.75□□□□□ -1.33
USP53-206ENST00000510737 FSCBQ5H9T9 825 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 CAMK1DQ8IU85 385 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 IPO4Q8TEX9 1081 aaKnown RBP6.75□□□□□ -1.33
USP53-206ENST00000510737 DNAJB3Q8WWF6 145 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 RMDN3Q96TC7 470 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 SORBS1Q9BX66 1292 aaKnown RBP6.75□□□□□ -1.33
USP53-206ENST00000510737 C1QTNF4Q9BXJ3 329 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 KLHL31Q9H511 634 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 CCDC134Q9H6E4 229 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 PADI3Q9ULW8 664 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 TNNQ9UQP3 1299 aa6.75□□□□□ -1.33
USP53-206ENST00000510737 MS4A18H0YCH9 400 aa6.74□□□□□ -1.33
USP53-206ENST00000510737 LDB2O43679 373 aa6.74□□□□□ -1.33
USP53-206ENST00000510737 LRP3O75074 770 aa6.74□□□□□ -1.33
USP53-206ENST00000510737 KCNK5O95279 499 aa6.74□□□□□ -1.33
USP53-206ENST00000510737 RETP07949 1114 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms