RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 PHF21BQ96EK2 531 aa9.19□□□□□ -0.94
HTT-205ENST00000509043 RSRC1Q96IZ7 334 aaKnown RBP9.19□□□□□ -0.94
HTT-205ENST00000509043 NSMCE3Q96MG7 304 aa9.19□□□□□ -0.94
HTT-205ENST00000509043 THTPAQ9BU02 230 aa9.19□□□□□ -0.94
HTT-205ENST00000509043 SLC46A2Q9BY10 475 aa9.19□□□□□ -0.94
HTT-205ENST00000509043 CLPBQ9H078 707 aa9.19□□□□□ -0.94
HTT-205ENST00000509043 EFCAB1Q9HAE3 211 aa9.19□□□□□ -0.94
HTT-205ENST00000509043 TLR9Q9NR96 1032 aa9.19□□□□□ -0.94
HTT-205ENST00000509043 RAD18Q9NS91 495 aa9.19□□□□□ -0.94
HTT-205ENST00000509043 ZDHHC7Q9NXF8 308 aa9.19□□□□□ -0.94
HTT-205ENST00000509043 MARK1Q9P0L2 795 aa9.19□□□□□ -0.94
HTT-205ENST00000509043 GNPTGQ9UJJ9 305 aa9.19□□□□□ -0.94
HTT-205ENST00000509043 MED16Q9Y2X0 877 aa9.19□□□□□ -0.94
HTT-205ENST00000509043 FCF1Q9Y324 198 aaKnown RBP9.19□□□□□ -0.94
HTT-205ENST00000509043 DHRS7Q9Y394 339 aa9.19□□□□□ -0.94
HTT-205ENST00000509043 TNPO3Q9Y5L0 923 aaKnown RBP9.19□□□□□ -0.94
HTT-205ENST00000509043 ANKRD36A6QL64 1941 aa9.19□□□□□ -0.94
HTT-205ENST00000509043 A0A088AWK7 358 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 NEMP2A6NFY4 417 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 GIPC1O14908 333 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 UBDO15205 165 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 ENTPD5O75356 428 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 GPC4O75487 556 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 CHEK2O96017 543 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 RPS17P08708 135 aaKnown RBP9.18□□□□□ -0.94
HTT-205ENST00000509043 SPATA31D3P0C874 917 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 MTHFD2P13995 350 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 HNRNPLP14866 589 aaKnown RBP eCLIP9.18□□□□□ -0.94
HTT-205ENST00000509043 GM2AP17900 193 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 KCNA5P22460 613 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 CTNNB1P35222 781 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 SPAM1P38567 509 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 VHLP40337 213 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 MRPL19P49406 292 aaKnown RBP9.18□□□□□ -0.94
HTT-205ENST00000509043 GRIK2Q13002 908 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 CUL3Q13618 768 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 PTPRCAPQ14761 206 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 PDCD2Q16342 344 aaPredicted RBP9.18□□□□□ -0.94
HTT-205ENST00000509043 MYLK3Q32MK0 819 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 KHDC1Q4VXA5 237 aaKnown RBP9.18□□□□□ -0.94
HTT-205ENST00000509043 ACSBG2Q5FVE4 666 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 CDKL4Q5MAI5 379 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 ATXN7L2Q5T6C5 722 aaPredicted RBP9.18□□□□□ -0.94
HTT-205ENST00000509043 C1orf146Q5VVC0 180 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 NXNQ6DKJ4 435 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 C22orf39Q6P5X5 142 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 TTC23LQ6PF05 361 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 PAQR3Q6TCH7 311 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 SPATA31D4Q6ZUB0 917 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 TPRG1Q6ZUI0 275 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 TAS2R42Q7RTR8 314 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 LYSMD3Q7Z3D4 306 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 RAVER1Q8IY67 606 aaKnown RBP9.18□□□□□ -0.94
HTT-205ENST00000509043 PIANPQ8IYJ0 282 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 PGAM4Q8N0Y7 254 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 PHTF2Q8N3S3 785 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 FBXW8Q8N3Y1 598 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 PAF1Q8N7H5 531 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 PPFIBP2Q8ND30 876 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 SHKBP1Q8TBC3 707 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 WFDC5Q8TCV5 224 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 AGR3Q8TD06 166 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 CD200R1Q8TD46 325 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 HCAR2Q8TDS4 363 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 ULK4Q96C45 1275 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 ECHDC3Q96DC8 303 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 SCRN2Q96FV2 425 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 SAMD11Q96NU1 681 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 LENG8Q96PV6 779 aaPredicted RBP9.18□□□□□ -0.94
HTT-205ENST00000509043 PLEKHG4BQ96PX9 1271 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 MCCC1Q96RQ3 725 aaPredicted RBP9.18□□□□□ -0.94
HTT-205ENST00000509043 GPR21Q99679 349 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 HTATIP2Q9BUP3 242 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 WDR55Q9H6Y2 383 aaPredicted RBP9.18□□□□□ -0.94
HTT-205ENST00000509043 CYP4F12Q9HCS2 524 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 MAN1C1Q9NR34 630 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 LATS2Q9NRM7 1088 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 TDP1Q9NUW8 608 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 NUDT4Q9NZJ9 180 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 SLC7A8Q9UHI5 535 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 SLC8A2Q9UPR5 921 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 LRRC42Q9Y546 428 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 SLC4A7Q9Y6M7 1214 aa9.18□□□□□ -0.94
HTT-205ENST00000509043 GLYATL1P3A0A0U1RQE8 302 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 C1orf232A0A0U1RR37 186 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 AGAP14A8MT82 685 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 BBIP1A8MTZ0 92 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 SUPT3HB4E1H0 165 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 WASH3PC4AMC7 463 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 BTN3A1O00481 513 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 NEMP1O14524 444 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 AZIN1O14977 448 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 CCL16O15467 120 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 TLL1O43897 1013 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 SNX2O60749 519 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 SUPT3HO75486 399 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 PRAMEF1O95521 474 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 TSPAN12O95859 305 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 MT-CO1P00395 513 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 S100BP04271 92 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms