RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 OR12D3Q9UGF7 316 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZNF639Q9UID6 485 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 OAZ3Q9UMX2 235 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 CDC14AQ9UNH5 594 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 ERGIC3Q9Y282 383 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 VWA7Q9Y334 891 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 FIS1Q9Y3D6 152 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 HES2Q9Y543 173 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 CSADQ9Y600 493 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 LCTP09848 1927 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 PTPRFP10586 1907 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 A0A0G2JMZ2 1700 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 LRRC37A2A6NM11 1700 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 RALGAPA2Q2PPJ7 1873 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 PLXNA1Q9UIW2 1896 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 DNAJC25-GNG10A0A024R161 153 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 SMIM28A0A1B0GU29 152 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 A0A1W2PPW3 197 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 FAM234BA2RU67 622 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 A6NJY4 79 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 SYCE1LA8MT33 242 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 TMEM229AB2RXF0 380 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 BOLA2-SMG1P6H3BVE0 249 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 K7EPI3 171 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 DFFAO00273 331 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 PLOD2O00469 737 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 CDK2AP1O14519 115 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 CXCL11O14625 94 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 EI24O14681 340 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 PPEF2O14830 753 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 PFDN6O15212 129 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 SLC22A1O15245 554 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 ACOX3O15254 700 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 INPP4BO15327 924 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 MRPS14O60783 128 aaKnown RBP4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 RECQL4O94761 1208 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 LRIG2O94898 1065 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 MLYCDO95822 493 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 ENO2P09104 434 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 RAP2AP10114 183 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 THRBP10828 461 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 NCAM1P13591 858 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 DPEP1P16444 411 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 PCSK2P16519 638 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 NELFEP18615 380 aaKnown RBP4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 S100A1P23297 94 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 SLC6A2P23975 617 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 LMO2P25791 158 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 MSX1P28360 303 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 PCSK1P29120 753 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 SERPINH1P50454 418 aaKnown RBP4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 RENBPP51606 427 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 BMXP51813 675 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 OXCT1P55809 520 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 RPS3AP61247 264 aaKnown RBP4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 ADARB1P78563 741 aaKnown RBP4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 GSTM4Q03013 218 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 LIPEQ05469 1076 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 CHRNB3Q05901 458 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 ARHGAP1Q07960 439 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 MTA1Q13330 715 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 OLIG2Q13516 323 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 KRR1Q13601 381 aaKnown RBP4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 DAG1Q14118 895 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 CBX2Q14781 532 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 TGFBIQ15582 683 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 NEDD8Q15843 81 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 GRIK4Q16099 956 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 DGUOKQ16854 277 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 VPS26BQ4G0F5 336 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 CYBRD1Q53TN4 286 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 XKR4Q5GH76 650 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 RAB41Q5JT25 222 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZNF618Q5T7W0 954 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 SYPL2Q5VXT5 272 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 EGFLAMQ63HQ2 1017 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 MRNIPQ6NTE8 343 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 ESRP1Q6NXG1 681 aaKnown RBP4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 GALNT18Q6P9A2 607 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 RANBP10Q6VN20 620 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 CLEC20AQ6ZU45 233 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 TMEM26Q6ZUK4 368 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 CCDC80Q76M96 950 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 TFAP2DQ7Z6R9 452 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZDHHC13Q8IUH4 622 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 FUNDC1Q8IVP5 155 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 FBXO16Q8IX29 292 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 CMTR2Q8IYT2 770 aaKnown RBP4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 TMCO5AQ8N6Q1 288 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 NPWQ8N729 165 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 PIK3C3Q8NEB9 887 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 PDZD8Q8NEN9 1154 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 ACVR1CQ8NER5 493 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 HMGCLL1Q8TB92 370 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 STAG3L4Q8TBR4 150 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 MAGEE2Q8TD90 523 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 USP33Q8TEY7 942 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 TWIST2Q8WVJ9 160 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 GLMNQ92990 594 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 ACDQ96AP0 544 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms