RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 ZMYND15Q9H091 742 aa11.97□□□□□ -0.49
PDLIM7-214ENST00000505746 STN1Q9H668 368 aaKnown RBP11.97□□□□□ -0.49
PDLIM7-214ENST00000505746 FASNP49327 2511 aaKnown RBP11.97□□□□□ -0.49
PDLIM7-214ENST00000505746 LRP4O75096 1905 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 TRBV23OR9-2A0A075B6M9 112 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 LRRD1A4D1F6 860 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 B8ZZF3 427 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 STMND1H3BQB6 276 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 KCNK1O00180 336 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 DNAJC6O75061 913 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 ATP1A1P05023 1023 aaKnown RBP11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 ITGB2P05107 769 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 MMP2P08253 660 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 FGF3P11487 239 aaPredicted RBP11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 SLC2A4P14672 509 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 ZFXP17010 805 aaPredicted RBP11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 DEKP35659 375 aaKnown RBP11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 IFI35P80217 286 aaPredicted RBP11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 AP1B1Q10567 949 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 QPCTQ16769 361 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 ASTE1Q2TB18 679 aaPredicted RBP11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 ODF2Q5BJF6 829 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 HENMT1Q5T8I9 393 aaKnown RBP11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 CHST15Q7LFX5 561 aaPredicted RBP11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 VSIG1Q86XK7 387 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 RHOT2Q8IXI1 618 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 SFRP1Q8N474 314 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 OR10G6Q8NH81 332 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 SLC35G2Q8TBE7 412 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 SLC37A2Q8TED4 501 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 SH3KBP1Q96B97 665 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 DNAJC7Q99615 494 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 ARHGAP9Q9BRR9 750 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 CNOT6Q9ULM6 557 aaKnown RBP11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 PCDHGA3Q9Y5H0 932 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 HEY1Q9Y5J3 304 aa11.96□□□□□ -0.49
PDLIM7-214ENST00000505746 LRRK1Q38SD2 2015 aa11.96□□□□□ -0.5
PDLIM7-214ENST00000505746 RP1P56715 2156 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 J3QKU1 62 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 APOL1O14791 398 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 PPP1R12AO14974 1030 aaPredicted RBP11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 DUX1O43812 170 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 THRAP10827 490 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 ATP1A2P50993 1020 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 HHEXQ03014 270 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 PDK1Q15118 436 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 SLC9A4Q6AI14 798 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 IYDQ6PHW0 289 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 LYSMD3Q7Z3D4 306 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 SLC9B2Q86UD5 537 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 NT5DC3Q86UY8 548 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 PLD5Q8N7P1 536 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 CNTD1Q8N815 330 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 AVL9Q8NBF6 648 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 CCDC42Q96M95 316 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 WDR24Q96S15 920 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 DDA1Q9BW61 102 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 ASPSCR1Q9BZE9 553 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 BRD8Q9H0E9 1235 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 CARD9Q9H257 536 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 ZFYVE1Q9HBF4 777 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 SARS2Q9NP81 518 aaKnown RBP11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 RAD18Q9NS91 495 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 PDP2Q9P2J9 529 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 PRKAB1Q9Y478 270 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 PCDHGA4Q9Y5G9 962 aa11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 OAS3Q9Y6K5 1087 aaKnown RBP11.95□□□□□ -0.5
PDLIM7-214ENST00000505746 SHROOM3Q8TF72 1996 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 KIR2DS5A0A0G2JLQ3 304 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 A0A0G2JNG1 304 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 OR5K4A6NMS3 321 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 FADS2P1A8MWK0 482 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 B4E171 279 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 GPR89AB7ZAQ6 455 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 KIR2DS3K7RE56 304 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 GRID2O43424 1007 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 NUAK1O60285 661 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 GPR89BP0CG08 455 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 SFTPCP11686 197 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 ACP5P13686 325 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 MPSTP25325 297 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 TSPAN7P41732 249 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 RAB15P59190 212 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 ZBTB17Q13105 803 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 SRSF6Q13247 344 aaKnown RBP11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 GALNT3Q14435 633 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 KIR2DS5Q14953 304 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 LINC00303Q3SY05 128 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 ZNF569Q5MCW4 686 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 DCAF12Q5T6F0 453 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 LRRC38Q5VT99 294 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 CCDC70Q6NSX1 233 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 WDR74Q6RFH5 385 aaPredicted RBP11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 BZW1Q7L1Q6 419 aaKnown RBP11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 VASH2Q86V25 355 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 RFX6Q8HWS3 928 aa11.94□□□□□ -0.5
PDLIM7-214ENST00000505746 PHYKPLQ8IUZ5 450 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms