RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 UBDO15205 165 aa13.24□□□□□ -0.29
LETM1-203ENST00000505551 DAB1O75553 588 aa13.24□□□□□ -0.29
LETM1-203ENST00000505551 CHRNA1P02708 482 aa13.24□□□□□ -0.29
LETM1-203ENST00000505551 TCF3P15923 654 aa13.24□□□□□ -0.29
LETM1-203ENST00000505551 RAB6CQ53S08 254 aa13.24□□□□□ -0.29
LETM1-203ENST00000505551 BRMS1LQ5PSV4 323 aa13.24□□□□□ -0.29
LETM1-203ENST00000505551 TBC1D21Q8IYX1 336 aa13.24□□□□□ -0.29
LETM1-203ENST00000505551 STYXQ8WUJ0 223 aa13.24□□□□□ -0.29
LETM1-203ENST00000505551 NXPE3Q969Y0 559 aa13.24□□□□□ -0.29
LETM1-203ENST00000505551 SLC10A4Q96EP9 437 aa13.24□□□□□ -0.29
LETM1-203ENST00000505551 ELMO2Q96JJ3 720 aa13.24□□□□□ -0.29
LETM1-203ENST00000505551 SPATA33Q96N06 139 aa13.24□□□□□ -0.29
LETM1-203ENST00000505551 MSTO1Q9BUK6 570 aa13.24□□□□□ -0.29
LETM1-203ENST00000505551 RAB6CQ9H0N0 254 aa13.24□□□□□ -0.29
LETM1-203ENST00000505551 ADPRHL2Q9NX46 363 aa13.24□□□□□ -0.29
LETM1-203ENST00000505551 SYBUQ9NX95 663 aa13.24□□□□□ -0.29
LETM1-203ENST00000505551 EGFL7Q9UHF1 273 aa13.24□□□□□ -0.29
LETM1-203ENST00000505551 PDE10AQ9Y233 779 aa13.24□□□□□ -0.29
LETM1-203ENST00000505551 PARP14Q460N5 1801 aa13.24□□□□□ -0.29
LETM1-203ENST00000505551 TCRBV5S2A0A599 114 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 ZNF99A8MXY4 864 aaPredicted RBP13.23□□□□□ -0.29
LETM1-203ENST00000505551 TARM1B6A8C7 271 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 KPNA6O60684 536 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 LDLRP01130 860 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 TNFSF9P41273 254 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 ZNF143P52747 638 aaPredicted RBP13.23□□□□□ -0.29
LETM1-203ENST00000505551 MRPS15P82914 257 aaKnown RBP13.23□□□□□ -0.29
LETM1-203ENST00000505551 SPANXN3Q5MJ09 141 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 C6orf141Q5SZD1 244 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 SH3PXD2AQ5TCZ1 1133 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 PRMT9Q6P2P2 845 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 TUBA3EQ6PEY2 450 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 RETREG3Q86VR2 466 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 HS6ST3Q8IZP7 471 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 CHDHQ8NE62 594 aaPredicted RBP13.23□□□□□ -0.29
LETM1-203ENST00000505551 MCRS1Q96EZ8 462 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 DEPDC7Q96QD5 511 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 TASP1Q9H6P5 420 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 IL37Q9NZH6 218 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 CFL2Q9Y281 166 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 STYXL1Q9Y6J8 313 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 SOCS7O14512 581 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 NPHS1O60500 1241 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 ARSAP15289 507 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 ACVR2AP27037 513 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 RRM2P31350 389 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 HSD17B2P37059 387 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 CAPSQ13938 189 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 ZIK1Q3SY52 487 aaPredicted RBP13.23□□□□□ -0.29
LETM1-203ENST00000505551 ADAMTSL2Q86TH1 951 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 IFNL1Q8IU54 200 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 GALNT12Q8IXK2 581 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 C8orf59Q8N0T1 100 aaPredicted RBP13.23□□□□□ -0.29
LETM1-203ENST00000505551 SEPT1Q8WYJ6 367 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 SDCCAG3Q96C92 435 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 ZNF300Q96RE9 604 aaPredicted RBP13.23□□□□□ -0.29
LETM1-203ENST00000505551 SERHL2Q9H4I8 314 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 EIF2B3Q9NR50 452 aaKnown RBP13.23□□□□□ -0.29
LETM1-203ENST00000505551 PAK1IP1Q9NWT1 392 aaPredicted RBP13.23□□□□□ -0.29
LETM1-203ENST00000505551 SIRT5Q9NXA8 310 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 UBA2Q9UBT2 640 aaPredicted RBP13.23□□□□□ -0.29
LETM1-203ENST00000505551 ANKRD6Q9Y2G4 727 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 SNX5Q9Y5X3 404 aa13.23□□□□□ -0.29
LETM1-203ENST00000505551 H3BUI4 141 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 POLR1CO15160 346 aaPredicted RBP13.22□□□□□ -0.29
LETM1-203ENST00000505551 TBX1O43435 398 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 POLBP06746 335 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 MYL3P08590 195 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 POLR2CP19387 275 aaPredicted RBP13.22□□□□□ -0.29
LETM1-203ENST00000505551 NUDT1P36639 197 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 SEPHS1P49903 392 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 PIGFQ07326 219 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 TAF2Q6P1X5 1199 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 CORO6Q6QEF8 472 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 STRADAQ7RTN6 431 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 GLRX5Q86SX6 157 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 CCDC103Q8IW40 242 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 RNF149Q8NC42 400 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 JPH3Q8WXH2 748 aaPredicted RBP13.22□□□□□ -0.29
LETM1-203ENST00000505551 QKIQ96PU8 341 aaKnown RBP eCLIP13.22□□□□□ -0.29
LETM1-203ENST00000505551 VPS35Q96QK1 796 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 GDF15Q99988 308 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 HOPXQ9BPY8 73 aaPredicted RBP13.22□□□□□ -0.29
LETM1-203ENST00000505551 CNPY3Q9BT09 278 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 MEAF6Q9HAF1 191 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 NRBP2Q9NSY0 501 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 PIH1D1Q9NWS0 290 aaKnown RBP13.22□□□□□ -0.29
LETM1-203ENST00000505551 CAB39Q9Y376 341 aaPredicted RBP13.22□□□□□ -0.29
LETM1-203ENST00000505551 MYO18AQ92614 2054 aaKnown RBP13.22□□□□□ -0.29
LETM1-203ENST00000505551 TRAV6A0A075B6T7 132 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 MAGEB16A2A368 324 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 BBIP1A8MTZ0 92 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 PRPSAP2O60256 369 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 DLX3O60479 287 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 TXNP10599 105 aaKnown RBP13.22□□□□□ -0.29
LETM1-203ENST00000505551 NAGAP17050 411 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 IL12AP29459 219 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 ICAM3P32942 547 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 HNF1BP35680 557 aa13.22□□□□□ -0.29
LETM1-203ENST00000505551 ALDH3A2P51648 485 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms