RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 CASP6P55212 293 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CRADDP78560 199 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 MRPS22P82650 360 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 DBPQ10586 325 aaPredicted RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 DGCR6Q14129 220 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 INPP5AQ14642 412 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 KCNAB1Q14722 419 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 FAM83EQ2M2I3 478 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 AGKQ53H12 422 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 XKR3Q5GH77 459 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 LAMTOR1Q6IAA8 161 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 KIAA1161Q6NSJ0 714 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 FUT10Q6P4F1 479 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 MEX3BQ6ZN04 569 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 KIAA0408Q6ZU52 694 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ACOT1Q86TX2 421 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CHSY1Q86X52 802 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 BEST2Q8NFU1 509 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 OR9Q1Q8NGQ5 310 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CALML6Q8TD86 181 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 DCAF4Q8WV16 495 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 HHIPL1Q96JK4 782 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 MARK4Q96L34 752 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 C7orf26Q96N11 449 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF558Q96NG5 402 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CLUHP3Q96NS8 147 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PANX3Q96QZ0 392 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 KCNA7Q96RP8 456 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ROPN1BQ9BZX4 212 aaPredicted RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 C12orf65Q9H3J6 166 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 OSGEPL1Q9H4B0 414 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 BRD9Q9H8M2 597 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ROPN1Q9HAT0 212 aaPredicted RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 JPH1Q9HDC5 661 aaPredicted RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PRDM8Q9NQV8 689 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 KCNH7Q9NS40 1196 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 TAS2R14Q9NYV8 317 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 H2AFY2Q9P0M6 372 aaPredicted RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 GRHPRQ9UBQ7 328 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 NUP50Q9UKX7 468 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PADI4Q9UM07 663 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 BOLA1Q9Y3E2 137 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PKP3Q9Y446 797 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 DNMT3AQ9Y6K1 912 aaPredicted RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ARID1AO14497 2285 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CNTNAP1P78357 1384 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 DOCK1Q14185 1865 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ANKRD12Q6UB98 2062 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CCL15-CCL14A0A0B4J2E2 113 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 C9orf170A2RU37 121 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 H0YC42 278 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 MSH4O15457 936 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PRPF4O43172 522 aaKnown RBP eCLIP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 NDUFS3O75489 264 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 TGDSO95455 350 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 JCHAINP01591 159 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CNPP09543 421 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 TSPAN8P19075 237 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 NOS3P29474 1203 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 TAGLN2P37802 199 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ELK3P41970 407 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 RECQLP46063 649 aaPredicted RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 MARCKSL1P49006 195 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 AIF1P55008 147 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 AQP4P55087 323 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CDH8P55286 799 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 SLC25A3Q00325 362 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 GRSF1Q12849 480 aaKnown RBP eCLIP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 NTRK3Q16288 839 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CCL15Q16663 113 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PPP1R3AQ16821 1122 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ZMAT1Q5H9K5 638 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 SLC6A19Q695T7 634 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CYB5R2Q6BCY4 276 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 SMYD5Q6GMV2 418 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PMF1Q6P1K2 205 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 LETMD1Q6P1Q0 360 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 DRICH1Q6PGQ1 229 aaPredicted RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 TMC5Q6UXY8 1006 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 RNF19BQ6ZMZ0 732 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 OTOAQ7RTW8 1153 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 MIB1Q86YT6 1006 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 TMPRSS6Q8IU80 811 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 DCP1BQ8IZD4 617 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CLYBLQ8N0X4 340 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 SLC43A2Q8N370 569 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PCDH20Q8N6Y1 951 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 TMIEQ8NEW7 156 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 DMBX1Q8NFW5 382 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 BLOC1S5Q8TDH9 187 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 WFIKKN2Q8TEU8 576 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ELMO1Q92556 727 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 HPS1Q92902 700 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 FAM162AQ96A26 154 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 TAMM41Q96BW9 452 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ST6GAL2Q96JF0 529 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 SERPINB12Q96P63 405 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 TAAR1Q96RJ0 339 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 RIT2Q99578 217 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 NUSAP1Q9BXS6 441 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms