RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 KIR2DS5Q14953 304 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 SLC6A19Q695T7 634 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 SYVN1Q86TM6 617 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 TRIM74Q86UV6 250 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 RHOT1Q8IXI2 618 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 AP2M1Q96CW1 435 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 SLC39A8Q9C0K1 460 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 FZD10Q9ULW2 581 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 PHTF1Q9UMS5 762 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 OTOGQ6ZRI0 2925 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 CSMD1Q96PZ7 3565 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 OR5K4A6NMS3 321 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 BIN1O00499 593 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 HTRA2O43464 458 aaPredicted RBP15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 SNX2O60749 519 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 RASSF9O75901 435 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 SOD1P00441 154 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 PYGLP06737 847 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 F3P13726 295 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 PTPN4P29074 926 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 HTR7P34969 479 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 AIF1P55008 147 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 TPI1P60174 286 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 RPS15P62841 145 aaKnown RBP15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 TECPR1Q7Z6L1 1165 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 ELOA2Q8IYF1 753 aaPredicted RBP15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 C19orf60Q96EN9 201 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 NSMCE3Q96MG7 304 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 TGM7Q96PF1 710 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 C11orf70Q9BRQ4 267 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 ABCG8Q9H221 673 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 CPNE7Q9UBL6 633 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 CD84Q9UIB8 345 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 PCDHGC4Q9Y5F7 938 aa15.65■□□□□ 0.1
PDLIM7-210ENST00000503827 ARHGAP10A1A4S6 786 aa15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 NPIPB15A6NHN6 443 aaPredicted RBP15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 KRT86O43790 486 aa15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 CEACAM4O75871 244 aa15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 PRF1P14222 555 aa15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 TYRP1P17643 537 aa15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 AMD1P17707 334 aa15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 RFC1P35251 1148 aaPredicted RBP15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 MTIF2P46199 727 aaKnown RBP15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 RPS18P62269 152 aaKnown RBP15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 IL10RBQ08334 325 aa15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 ZC3H18Q86VM9 953 aaKnown RBP15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 IQCKQ8N0W5 287 aa15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 EXD1Q8NHP7 514 aa15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 EPS8L1Q8TE68 723 aa15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 SNRNP40Q96DI7 357 aaKnown RBP15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 SCRN2Q96FV2 425 aa15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 PSKH2Q96QS6 385 aa15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 RUFY1Q96T51 708 aa15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 SELENOOQ9BVL4 669 aa15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 ENTPD4Q9Y227 616 aa15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 KCNK6Q9Y257 313 aa15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 PRKAB1Q9Y478 270 aa15.64■□□□□ 0.09
PDLIM7-210ENST00000503827 CROCCQ5TZA2 2017 aa15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 TTC24A2A3L6 582 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 ANKUB1A6NFN9 424 aa15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 UBXN7O94888 489 aa15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 WDR59Q6PJI9 974 aa15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 USP45Q70EL2 814 aa15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 TSPAN33Q86UF1 283 aa15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 ZNF677Q86XU0 584 aa15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 RBMXL3Q8N7X1 1067 aaKnown RBP15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 FDCSPQ8NFU4 85 aa15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 COX14Q96I36 57 aa15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 RUBCNLQ9H714 662 aa15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 UCK1Q9HA47 277 aa15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 PDE7BQ9NP56 450 aa15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 ASF1BQ9NVP2 202 aa15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 OGFRQ9NZT2 677 aa15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 VPS18Q9P253 973 aa15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 KIAA1468Q9P260 1216 aa15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 FHOD1Q9Y613 1164 aa15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 F8P00451 2351 aa15.63■□□□□ 0.09
PDLIM7-210ENST00000503827 DFFAO00273 331 aa15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 CCP110O43303 1012 aa15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 DNAJC6O75061 913 aa15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 CYP1A1P04798 512 aaPredicted RBP15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 ACP5P13686 325 aa15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 TNFAIP3P21580 790 aa15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 PTGIRP43119 386 aa15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 ITGA1P56199 1179 aa15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 PDE1BQ01064 536 aa15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 IL10RAQ13651 578 aa15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 LBRQ14739 615 aaKnown RBP15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 CACHD1Q5VU97 1274 aa15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 FAM199XQ6PEV8 388 aaPredicted RBP15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 RFLNAQ6ZTI6 216 aa15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 NLRP8Q86W28 1048 aa15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 SLC30A5Q8TAD4 765 aa15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 SCAMP4Q969E2 229 aa15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 FCRL4Q96PJ5 515 aa15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 RARRES3Q9UL19 164 aa15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 FARSAQ9Y285 508 aaKnown RBP15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 PCYT1BQ9Y5K3 369 aaPredicted RBP15.62■□□□□ 0.09
PDLIM7-210ENST00000503827 APCP25054 2843 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms