RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 RAB2BQ8WUD1 216 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 TAPBPLQ9BX59 468 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 DBNDD1Q9H9R9 158 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 TMEM100Q9NV29 134 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 C1orf109Q9NX04 203 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 MED31Q9Y3C7 131 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 PIP5K1CO60331 668 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 MT-CO2P00403 227 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 ACO1P21399 889 aaKnown RBP11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 SPOCK1Q08629 439 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 MIB1Q86YT6 1006 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 OR2W6PQ8NHA6 318 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 TCTEX1D2Q8WW35 142 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 UFD1Q92890 307 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 TRMOQ9BU70 441 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 CELF4Q9BZC1 486 aaKnown RBP11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 BRINP2Q9C0B6 783 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 ADCY10Q96PN6 1610 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 DCDC2CA8MYV0 355 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 CAMTA2O94983 1202 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 SUPT20HL2P0C7V6 817 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 PPP1R13LQ8WUF5 828 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 SMARCD2Q92925 531 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 PRMT6Q96LA8 375 aaPredicted RBP11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 CFAP97Q9P2B7 532 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 CLDN4O14493 209 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 SLC25A27O95847 323 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 CSTBP04080 98 aaKnown RBP11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 VAMP1P23763 118 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 E2F1Q01094 437 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 PTPN20Q4JDL3 420 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 DENND1CQ8IV53 801 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 RDH11Q8TC12 318 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 BAP1Q92560 729 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 KCTD15Q96SI1 283 aaPredicted RBP11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 KLQ9UEF7 1012 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 ZNF268Q14587 947 aaPredicted RBP11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 PUM1Q14671 1186 aaKnown RBP eCLIP11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 NDUFA9Q16795 377 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 PHC2Q8IXK0 858 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 SYNPOQ8N3V7 929 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 TBC1D15Q8TC07 691 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 CAVIN3Q969G5 261 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 SLC47A1Q96FL8 570 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 CLPTM1LQ96KA5 538 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 SEMA6AQ9H2E6 1030 aa11.16□□□□□ -0.62
AC055713.1-201ENST00000498967 PTPRZ1P23471 2315 aaPredicted RBP11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 CLN5O75503 358 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 PRAMEF1O95521 474 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 FADS2O95864 444 aaKnown RBP11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 ABL2P42684 1182 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 DCDC1P59894 354 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 CREMQ03060 361 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 FAM46CQ5VWP2 391 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 PI16Q6UXB8 463 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 CAND1Q86VP6 1230 aaKnown RBP11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 GTF2F2P13984 249 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 ADH6P28332 368 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 SNRPD1P62314 119 aaKnown RBP11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 TLE2Q04725 743 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 KCNN1Q92952 543 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 SLC4A5Q9BY07 1137 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 SPG21Q9NZD8 308 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 KERAO60938 352 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 UGT2B10P36537 528 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 ELOAQ14241 798 aaKnown RBP11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 TSGA10IPQ3SY00 556 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 RD3Q7Z3Z2 195 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 CCDC71Q8IV32 467 aaPredicted RBP11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 FAM160A2Q8N612 972 aaPredicted RBP11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 C22orf15Q8WYQ4 148 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 SUSD6Q92537 303 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 POLR1EQ9GZS1 481 aaKnown RBP11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 ADAM28Q9UKQ2 775 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 ARAP3Q8WWN8 1544 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 ZNF335Q9H4Z2 1342 aaPredicted RBP11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 ITGA2BP08514 1039 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 MAPK10P53779 464 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 FGL1Q08830 312 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 PFKFB4Q16877 469 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 YTHDF3Q7Z739 585 aaKnown RBP11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 SGMS1Q86VZ5 419 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 EFCAB3Q8N7B9 438 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 MOAP1Q96BY2 351 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 C12orf65Q9H3J6 166 aaKnown RBP11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 CD93Q9NPY3 652 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 KCNH7Q9NS40 1196 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 MYMKA6NI61 221 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 C2CD2LO14523 706 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 BCKDKO14874 412 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 THP07101 528 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 ZNF20P17024 532 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 CD40LGP29965 261 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 DUSP4Q13115 394 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 SPIN3Q5JUX0 258 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 CCDC28AQ8IWP9 274 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 ADGRF4Q8IZF3 695 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 COLGALT1Q8NBJ5 622 aa11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 C12orf43Q96C57 262 aaKnown RBP11.15□□□□□ -0.62
AC055713.1-201ENST00000498967 DYNLL2Q96FJ2 89 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms